Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:103699333-105219337

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89 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slain1 14 103650228 to 103704907 54679 + protein coding gene SLAIN motif family, member 1
Slain1os 14 103692983 to 103699432 6449 - antisense lncRNA gene SLAIN motif family, member 1, opposite strand
Tssr127072 14 103699512 to 103699523 11 + TSS region transcription start site region 127072
Cpgi6818 14 103702520 to 103702826 306 CpG island CpG island 6818
Gm35197 14 103719026 to 103867713 148687 + lncRNA gene predicted gene, 35197
Tssr127073 14 103719856 to 103719877 21 + TSS region transcription start site region 127073
2700054A04Rik 14 103776620 to 103777483 863 unclassified gene RIKEN cDNA 2700054A04 gene
Gm35116 14 103778919 to 103784419 5500 + lncRNA gene predicted gene, 35116
Ednrb 14 103814625 to 103844402 29777 - protein coding gene endothelin receptor type B
Tssr130117 14 103815750 to 103815763 13 - TSS region transcription start site region 130117
Tssr130118 14 103815867 to 103815872 5 - TSS region transcription start site region 130118
Tssr127074 14 103827200 to 103827209 9 + TSS region transcription start site region 127074
Cpgi6819 14 103843005 to 103844416 1411 CpG island CpG island 6819
Tssr130119 14 103843058 to 103843072 14 - TSS region transcription start site region 130119
Tssr130120 14 103843138 to 103843155 17 - TSS region transcription start site region 130120
Tssr130121 14 103843473 to 103843484 11 - TSS region transcription start site region 130121
Tssr130122 14 103843540 to 103843551 11 - TSS region transcription start site region 130122
Tssr130123 14 103843594 to 103843601 7 - TSS region transcription start site region 130123
Tssr130124 14 103843626 to 103843633 7 - TSS region transcription start site region 130124
Tssr130125 14 103843685 to 103843703 18 - TSS region transcription start site region 130125
Tssr130126 14 103843710 to 103843715 5 - TSS region transcription start site region 130126
Tssr130127 14 103843821 to 103843828 7 - TSS region transcription start site region 130127
Tssr130128 14 103844166 to 103844179 13 - TSS region transcription start site region 130128
Tssr130129 14 103844187 to 103844198 11 - TSS region transcription start site region 130129
Tssr130130 14 103844208 to 103844221 13 - TSS region transcription start site region 130130
Tssr130131 14 103844235 to 103844238 3 - TSS region transcription start site region 130131
Tssr130132 14 103844246 to 103844267 21 - TSS region transcription start site region 130132
Tssr130133 14 103844268 to 103844298 30 - TSS region transcription start site region 130133
Tssr130134 14 103844300 to 103844305 5 - TSS region transcription start site region 130134
Tssr130135 14 103844314 to 103844340 26 - TSS region transcription start site region 130135
Tssr130136 14 103844344 to 103844359 15 - TSS region transcription start site region 130136
Tssr130137 14 103844391 to 103844403 12 - TSS region transcription start site region 130137
Tssr130138 14 103844420 to 103844432 12 - TSS region transcription start site region 130138
Tssr130139 14 103844448 to 103844464 16 - TSS region transcription start site region 130139
4930518C04Rik 14 103898761 to 103900644 1883 + lncRNA gene RIKEN cDNA 4930518C04 gene
Tssr127075 14 103899479 to 103899488 9 + TSS region transcription start site region 127075
Gm37910 14 103948096 to 103949811 1715 + unclassified gene predicted gene, 37910
4930432J09Rik 14 103977628 to 104027142 49514 - lincRNA gene RIKEN cDNA 4930432J09 gene
Tssr130140 14 103998251 to 103998260 9 - TSS region transcription start site region 130140
Tssr130141 14 103998273 to 103998284 11 - TSS region transcription start site region 130141
Gm41238 14 104007205 to 104039607 32402 + lncRNA gene predicted gene, 41238
Gm41237 14 104032324 to 104034925 2601 - lncRNA gene predicted gene, 41237
D14Mit94 14 104096972 to 104097072 100 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 94
Tssr127076 14 104129058 to 104129059 1 + TSS region transcription start site region 127076
Gm35308 14 104151377 to 104153369 1992 + lncRNA gene predicted gene, 35308
Tssr127077 14 104190988 to 104191008 20 + TSS region transcription start site region 127077
D130079A08Rik 14 104288431 to 104459336 170905 - lincRNA gene RIKEN cDNA D130079A08 gene
Gm35362 14 104445370 to 104456277 10907 + lncRNA gene predicted gene, 35362
Tssr130142 14 104459333 to 104459337 4 - TSS region transcription start site region 130142
Tssr130143 14 104459483 to 104459486 3 - TSS region transcription start site region 130143
Cpgi6820 14 104460488 to 104460836 348 CpG island CpG island 6820
Cpgi6821 14 104460954 to 104461167 213 CpG island CpG island 6821
Pou4f1 14 104461676 to 104467999 6323 - protein coding gene POU domain, class 4, transcription factor 1
Tssr130144 14 104464656 to 104464662 6 - TSS region transcription start site region 130144
Cpgi6822 14 104465361 to 104468675 3314 CpG island CpG island 6822
Tssr130145 14 104467984 to 104468041 57 - TSS region transcription start site region 130145
Gm35623 14 104468198 to 104477234 9036 + lncRNA gene predicted gene, 35623
Cpgi6823 14 104472908 to 104473515 607 CpG island CpG island 6823
Cpgi6824 14 104473778 to 104474197 419 CpG island CpG island 6824
Rnf219 14 104477536 to 104522645 45109 - protein coding gene ring finger protein 219
Gm49205 14 104481491 to 104482283 792 + pseudogene predicted gene, 49205
Tssr130146 14 104521802 to 104521806 4 - TSS region transcription start site region 130146
Cpgi6825 14 104522044 to 104522841 797 CpG island CpG island 6825
Tssr130147 14 104522615 to 104522707 92 - TSS region transcription start site region 130147
Gm22021 14 104591094 to 104591200 106 + snRNA gene predicted gene, 22021
Gm35680 14 104600549 to 104607850 7301 + lncRNA gene predicted gene, 35680
Gm25724 14 104628944 to 104629060 116 - snoRNA gene predicted gene, 25724
D130009I18Rik 14 104639144 to 104966783 327639 + lincRNA gene RIKEN cDNA D130009I18 gene
Cpgi6826 14 104796497 to 104796683 186 CpG island CpG island 6826
Gm24280 14 104971427 to 104971560 133 + snoRNA gene predicted gene, 24280
Tssr127078 14 105043412 to 105043428 16 + TSS region transcription start site region 127078
Gm5671 14 105043450 to 105044354 904 + pseudogene predicted gene 5671
D14Mit205 14 105054651 to 105054760 109 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 205
Gm17066 14 105109390 to 105114676 5286 - lncRNA gene predicted gene 17066
Rbm26 14 105114519 to 105177327 62808 - protein coding gene RNA binding motif protein 26
Tssr130148 14 105114620 to 105114754 134 - TSS region transcription start site region 130148
Tssr130149 14 105115310 to 105115324 14 - TSS region transcription start site region 130149
Tssr130150 14 105116964 to 105116966 2 - TSS region transcription start site region 130150
Tssr130151 14 105138375 to 105138383 8 - TSS region transcription start site region 130151
Tssr130152 14 105138997 to 105139002 5 - TSS region transcription start site region 130152
8430411E10Rik 14 105167777 to 105168075 298 unclassified gene RIKEN cDNA 8430411E10 gene
Cpgi6827 14 105176395 to 105177702 1307 CpG island CpG island 6827
Tssr130153 14 105176872 to 105176918 46 - TSS region transcription start site region 130153
Tssr130154 14 105177253 to 105177261 8 - TSS region transcription start site region 130154
Tssr130155 14 105177263 to 105177277 14 - TSS region transcription start site region 130155
Tssr130156 14 105177280 to 105177334 54 - TSS region transcription start site region 130156
Tssr127079 14 105177357 to 105177405 48 + TSS region transcription start site region 127079
Gm48937 14 105184024 to 105184385 361 - pseudogene predicted gene, 48937
Gm6201 14 105199326 to 105201099 1773 - pseudogene predicted gene 6201