Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:103229246-104459267

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75 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mycbp2 14 103113411 to 103346800 233389 - protein coding gene MYC binding protein 2, E3 ubiquitin protein ligase
Cpgi6814 14 103345901 to 103347223 1322 CpG island CpG island 6814
Tssr130111 14 103346349 to 103346365 16 - TSS region transcription start site region 130111
Tssr127062 14 103346574 to 103346596 22 + TSS region transcription start site region 127062
Tssr130112 14 103346639 to 103346661 22 - TSS region transcription start site region 130112
Tssr130113 14 103346723 to 103346734 11 - TSS region transcription start site region 130113
Tssr130114 14 103346745 to 103346756 11 - TSS region transcription start site region 130114
Tssr130115 14 103346765 to 103346841 76 - TSS region transcription start site region 130115
Tssr127063 14 103346874 to 103346946 72 + TSS region transcription start site region 127063
Tssr127064 14 103347063 to 103347081 18 + TSS region transcription start site region 127064
Cpgi6815 14 103349544 to 103350286 742 CpG island CpG island 6815
Gm4654 14 103370465 to 103371446 981 - pseudogene predicted gene 4654
1700087I21Rik 14 103424905 to 103449867 24962 + lincRNA gene RIKEN cDNA 1700087I21 gene
Tssr127065 14 103438677 to 103438683 6 + TSS region transcription start site region 127065
Gm34907 14 103463924 to 103512619 48695 + lincRNA gene predicted gene, 34907
Tssr4513 14 103464382 to 103464407 25 + TSS region transcription start site region 4513
Tssr127066 14 103513304 to 103513324 20 + TSS region transcription start site region 127066
Tssr127067 14 103513328 to 103513377 49 + TSS region transcription start site region 127067
Scel 14 103513342 to 103612797 99455 + protein coding gene sciellin
Tssr127068 14 103513378 to 103513429 51 + TSS region transcription start site region 127068
Tssr127069 14 103513438 to 103513443 5 + TSS region transcription start site region 127069
Cpgi6816 14 103649885 to 103651339 1454 CpG island CpG island 6816
Tssr127070 14 103650208 to 103650243 35 + TSS region transcription start site region 127070
Slain1 14 103650228 to 103704907 54679 + protein coding gene SLAIN motif family, member 1
Tssr127071 14 103650250 to 103650257 7 + TSS region transcription start site region 127071
Gm22877 14 103650453 to 103650557 104 - miRNA gene predicted gene, 22877
Tssr130116 14 103651375 to 103651384 9 - TSS region transcription start site region 130116
Cpgi6817 14 103684358 to 103684703 345 CpG island CpG island 6817
Slain1os 14 103692983 to 103699432 6449 - antisense lncRNA gene SLAIN motif family, member 1, opposite strand
Tssr127072 14 103699512 to 103699523 11 + TSS region transcription start site region 127072
Cpgi6818 14 103702520 to 103702826 306 CpG island CpG island 6818
Gm35197 14 103719026 to 103867713 148687 + lncRNA gene predicted gene, 35197
Tssr127073 14 103719856 to 103719877 21 + TSS region transcription start site region 127073
2700054A04Rik 14 103776620 to 103777483 863 unclassified gene RIKEN cDNA 2700054A04 gene
Gm35116 14 103778919 to 103784419 5500 + lncRNA gene predicted gene, 35116
Ednrb 14 103814625 to 103844402 29777 - protein coding gene endothelin receptor type B
Tssr130117 14 103815750 to 103815763 13 - TSS region transcription start site region 130117
Tssr130118 14 103815867 to 103815872 5 - TSS region transcription start site region 130118
Tssr127074 14 103827200 to 103827209 9 + TSS region transcription start site region 127074
Cpgi6819 14 103843005 to 103844416 1411 CpG island CpG island 6819
Tssr130119 14 103843058 to 103843072 14 - TSS region transcription start site region 130119
Tssr130120 14 103843138 to 103843155 17 - TSS region transcription start site region 130120
Tssr130121 14 103843473 to 103843484 11 - TSS region transcription start site region 130121
Tssr130122 14 103843540 to 103843551 11 - TSS region transcription start site region 130122
Tssr130123 14 103843594 to 103843601 7 - TSS region transcription start site region 130123
Tssr130124 14 103843626 to 103843633 7 - TSS region transcription start site region 130124
Tssr130125 14 103843685 to 103843703 18 - TSS region transcription start site region 130125
Tssr130126 14 103843710 to 103843715 5 - TSS region transcription start site region 130126
Tssr130127 14 103843821 to 103843828 7 - TSS region transcription start site region 130127
Tssr130128 14 103844166 to 103844179 13 - TSS region transcription start site region 130128
Tssr130129 14 103844187 to 103844198 11 - TSS region transcription start site region 130129
Tssr130130 14 103844208 to 103844221 13 - TSS region transcription start site region 130130
Tssr130131 14 103844235 to 103844238 3 - TSS region transcription start site region 130131
Tssr130132 14 103844246 to 103844267 21 - TSS region transcription start site region 130132
Tssr130133 14 103844268 to 103844298 30 - TSS region transcription start site region 130133
Tssr130134 14 103844300 to 103844305 5 - TSS region transcription start site region 130134
Tssr130135 14 103844314 to 103844340 26 - TSS region transcription start site region 130135
Tssr130136 14 103844344 to 103844359 15 - TSS region transcription start site region 130136
Tssr130137 14 103844391 to 103844403 12 - TSS region transcription start site region 130137
Tssr130138 14 103844420 to 103844432 12 - TSS region transcription start site region 130138
Tssr130139 14 103844448 to 103844464 16 - TSS region transcription start site region 130139
4930518C04Rik 14 103898761 to 103900644 1883 + lncRNA gene RIKEN cDNA 4930518C04 gene
Tssr127075 14 103899479 to 103899488 9 + TSS region transcription start site region 127075
Gm37910 14 103948096 to 103949811 1715 + unclassified gene predicted gene, 37910
4930432J09Rik 14 103977628 to 104027142 49514 - lincRNA gene RIKEN cDNA 4930432J09 gene
Tssr130140 14 103998251 to 103998260 9 - TSS region transcription start site region 130140
Tssr130141 14 103998273 to 103998284 11 - TSS region transcription start site region 130141
Gm41238 14 104007205 to 104039607 32402 + lncRNA gene predicted gene, 41238
Gm41237 14 104032324 to 104034925 2601 - lncRNA gene predicted gene, 41237
D14Mit94 14 104096972 to 104097072 100 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 94
Tssr127076 14 104129058 to 104129059 1 + TSS region transcription start site region 127076
Gm35308 14 104151377 to 104153369 1992 + lncRNA gene predicted gene, 35308
Tssr127077 14 104190988 to 104191008 20 + TSS region transcription start site region 127077
D130079A08Rik 14 104288431 to 104459336 170905 - lincRNA gene RIKEN cDNA D130079A08 gene
Gm35362 14 104445370 to 104456277 10907 + lncRNA gene predicted gene, 35362