Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:103073328-103953377

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85 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cln5 14 103070216 to 103077628 7412 + protein coding gene ceroid-lipofuscinosis, neuronal 5
Tssr127057 14 103073345 to 103073359 14 + TSS region transcription start site region 127057
Tssr127058 14 103074317 to 103074330 13 + TSS region transcription start site region 127058
Tssr127059 14 103074393 to 103074408 15 + TSS region transcription start site region 127059
Tssr127060 14 103075916 to 103075949 33 + TSS region transcription start site region 127060
Fbxl3 14 103080239 to 103099539 19300 - protein coding gene F-box and leucine-rich repeat protein 3
Tssr127061 14 103098486 to 103098514 28 + TSS region transcription start site region 127061
Cpgi6813 14 103098547 to 103099956 1409 CpG island CpG island 6813
Tssr130098 14 103098896 to 103098907 11 - TSS region transcription start site region 130098
Tssr130099 14 103098955 to 103098970 15 - TSS region transcription start site region 130099
Tssr130100 14 103098991 to 103099045 54 - TSS region transcription start site region 130100
Tssr130101 14 103099487 to 103099497 10 - TSS region transcription start site region 130101
Tssr130102 14 103099499 to 103099550 51 - TSS region transcription start site region 130102
Tssr130103 14 103099560 to 103099571 11 - TSS region transcription start site region 130103
Mycbp2 14 103113411 to 103346800 233389 - protein coding gene MYC binding protein 2, E3 ubiquitin protein ligase
Tssr130104 14 103154173 to 103154178 5 - TSS region transcription start site region 130104
Tssr130105 14 103156392 to 103156403 11 - TSS region transcription start site region 130105
Tssr130106 14 103218945 to 103218958 13 - TSS region transcription start site region 130106
Tssr130107 14 103218970 to 103218990 20 - TSS region transcription start site region 130107
Tssr130108 14 103218991 to 103219025 34 - TSS region transcription start site region 130108
Tssr130109 14 103219032 to 103219043 11 - TSS region transcription start site region 130109
Tssr130110 14 103219158 to 103219180 22 - TSS region transcription start site region 130110
Cpgi6814 14 103345901 to 103347223 1322 CpG island CpG island 6814
Tssr130111 14 103346349 to 103346365 16 - TSS region transcription start site region 130111
Tssr127062 14 103346574 to 103346596 22 + TSS region transcription start site region 127062
Tssr130112 14 103346639 to 103346661 22 - TSS region transcription start site region 130112
Tssr130113 14 103346723 to 103346734 11 - TSS region transcription start site region 130113
Tssr130114 14 103346745 to 103346756 11 - TSS region transcription start site region 130114
Tssr130115 14 103346765 to 103346841 76 - TSS region transcription start site region 130115
Tssr127063 14 103346874 to 103346946 72 + TSS region transcription start site region 127063
Tssr127064 14 103347063 to 103347081 18 + TSS region transcription start site region 127064
Cpgi6815 14 103349544 to 103350286 742 CpG island CpG island 6815
Gm4654 14 103370465 to 103371446 981 - pseudogene predicted gene 4654
1700087I21Rik 14 103424905 to 103449867 24962 + lincRNA gene RIKEN cDNA 1700087I21 gene
Tssr127065 14 103438677 to 103438683 6 + TSS region transcription start site region 127065
Gm34907 14 103463924 to 103512619 48695 + lincRNA gene predicted gene, 34907
Tssr4513 14 103464382 to 103464407 25 + TSS region transcription start site region 4513
Tssr127066 14 103513304 to 103513324 20 + TSS region transcription start site region 127066
Tssr127067 14 103513328 to 103513377 49 + TSS region transcription start site region 127067
Scel 14 103513342 to 103612797 99455 + protein coding gene sciellin
Tssr127068 14 103513378 to 103513429 51 + TSS region transcription start site region 127068
Tssr127069 14 103513438 to 103513443 5 + TSS region transcription start site region 127069
Cpgi6816 14 103649885 to 103651339 1454 CpG island CpG island 6816
Tssr127070 14 103650208 to 103650243 35 + TSS region transcription start site region 127070
Slain1 14 103650228 to 103704907 54679 + protein coding gene SLAIN motif family, member 1
Tssr127071 14 103650250 to 103650257 7 + TSS region transcription start site region 127071
Gm22877 14 103650453 to 103650557 104 - miRNA gene predicted gene, 22877
Tssr130116 14 103651375 to 103651384 9 - TSS region transcription start site region 130116
Cpgi6817 14 103684358 to 103684703 345 CpG island CpG island 6817
Slain1os 14 103692983 to 103699432 6449 - antisense lncRNA gene SLAIN motif family, member 1, opposite strand
Tssr127072 14 103699512 to 103699523 11 + TSS region transcription start site region 127072
Cpgi6818 14 103702520 to 103702826 306 CpG island CpG island 6818
Gm35197 14 103719026 to 103867713 148687 + lncRNA gene predicted gene, 35197
Tssr127073 14 103719856 to 103719877 21 + TSS region transcription start site region 127073
2700054A04Rik 14 103776620 to 103777483 863 unclassified gene RIKEN cDNA 2700054A04 gene
Gm35116 14 103778919 to 103784419 5500 + lncRNA gene predicted gene, 35116
Ednrb 14 103814625 to 103844402 29777 - protein coding gene endothelin receptor type B
Tssr130117 14 103815750 to 103815763 13 - TSS region transcription start site region 130117
Tssr130118 14 103815867 to 103815872 5 - TSS region transcription start site region 130118
Tssr127074 14 103827200 to 103827209 9 + TSS region transcription start site region 127074
Cpgi6819 14 103843005 to 103844416 1411 CpG island CpG island 6819
Tssr130119 14 103843058 to 103843072 14 - TSS region transcription start site region 130119
Tssr130120 14 103843138 to 103843155 17 - TSS region transcription start site region 130120
Tssr130121 14 103843473 to 103843484 11 - TSS region transcription start site region 130121
Tssr130122 14 103843540 to 103843551 11 - TSS region transcription start site region 130122
Tssr130123 14 103843594 to 103843601 7 - TSS region transcription start site region 130123
Tssr130124 14 103843626 to 103843633 7 - TSS region transcription start site region 130124
Tssr130125 14 103843685 to 103843703 18 - TSS region transcription start site region 130125
Tssr130126 14 103843710 to 103843715 5 - TSS region transcription start site region 130126
Tssr130127 14 103843821 to 103843828 7 - TSS region transcription start site region 130127
Tssr130128 14 103844166 to 103844179 13 - TSS region transcription start site region 130128
Tssr130129 14 103844187 to 103844198 11 - TSS region transcription start site region 130129
Tssr130130 14 103844208 to 103844221 13 - TSS region transcription start site region 130130
Tssr130131 14 103844235 to 103844238 3 - TSS region transcription start site region 130131
Tssr130132 14 103844246 to 103844267 21 - TSS region transcription start site region 130132
Tssr130133 14 103844268 to 103844298 30 - TSS region transcription start site region 130133
Tssr130134 14 103844300 to 103844305 5 - TSS region transcription start site region 130134
Tssr130135 14 103844314 to 103844340 26 - TSS region transcription start site region 130135
Tssr130136 14 103844344 to 103844359 15 - TSS region transcription start site region 130136
Tssr130137 14 103844391 to 103844403 12 - TSS region transcription start site region 130137
Tssr130138 14 103844420 to 103844432 12 - TSS region transcription start site region 130138
Tssr130139 14 103844448 to 103844464 16 - TSS region transcription start site region 130139
4930518C04Rik 14 103898761 to 103900644 1883 + lncRNA gene RIKEN cDNA 4930518C04 gene
Tssr127075 14 103899479 to 103899488 9 + TSS region transcription start site region 127075
Gm37910 14 103948096 to 103949811 1715 + unclassified gene predicted gene, 37910