Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:103063058-104623072

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120 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi6812 14 103069612 to 103070845 1233 CpG island CpG island 6812
Tssr130097 14 103070126 to 103070143 17 - TSS region transcription start site region 130097
Cln5 14 103070216 to 103077628 7412 + protein coding gene ceroid-lipofuscinosis, neuronal 5
Tssr127053 14 103070222 to 103070233 11 + TSS region transcription start site region 127053
Tssr127054 14 103070235 to 103070256 21 + TSS region transcription start site region 127054
Tssr127055 14 103070259 to 103070348 89 + TSS region transcription start site region 127055
Tssr127056 14 103073266 to 103073296 30 + TSS region transcription start site region 127056
Tssr127057 14 103073345 to 103073359 14 + TSS region transcription start site region 127057
Tssr127058 14 103074317 to 103074330 13 + TSS region transcription start site region 127058
Tssr127059 14 103074393 to 103074408 15 + TSS region transcription start site region 127059
Tssr127060 14 103075916 to 103075949 33 + TSS region transcription start site region 127060
Fbxl3 14 103080239 to 103099539 19300 - protein coding gene F-box and leucine-rich repeat protein 3
Tssr127061 14 103098486 to 103098514 28 + TSS region transcription start site region 127061
Cpgi6813 14 103098547 to 103099956 1409 CpG island CpG island 6813
Tssr130098 14 103098896 to 103098907 11 - TSS region transcription start site region 130098
Tssr130099 14 103098955 to 103098970 15 - TSS region transcription start site region 130099
Tssr130100 14 103098991 to 103099045 54 - TSS region transcription start site region 130100
Tssr130101 14 103099487 to 103099497 10 - TSS region transcription start site region 130101
Tssr130102 14 103099499 to 103099550 51 - TSS region transcription start site region 130102
Tssr130103 14 103099560 to 103099571 11 - TSS region transcription start site region 130103
Mycbp2 14 103113411 to 103346800 233389 - protein coding gene MYC binding protein 2, E3 ubiquitin protein ligase
Tssr130104 14 103154173 to 103154178 5 - TSS region transcription start site region 130104
Tssr130105 14 103156392 to 103156403 11 - TSS region transcription start site region 130105
Tssr130106 14 103218945 to 103218958 13 - TSS region transcription start site region 130106
Tssr130107 14 103218970 to 103218990 20 - TSS region transcription start site region 130107
Tssr130108 14 103218991 to 103219025 34 - TSS region transcription start site region 130108
Tssr130109 14 103219032 to 103219043 11 - TSS region transcription start site region 130109
Tssr130110 14 103219158 to 103219180 22 - TSS region transcription start site region 130110
Cpgi6814 14 103345901 to 103347223 1322 CpG island CpG island 6814
Tssr130111 14 103346349 to 103346365 16 - TSS region transcription start site region 130111
Tssr127062 14 103346574 to 103346596 22 + TSS region transcription start site region 127062
Tssr130112 14 103346639 to 103346661 22 - TSS region transcription start site region 130112
Tssr130113 14 103346723 to 103346734 11 - TSS region transcription start site region 130113
Tssr130114 14 103346745 to 103346756 11 - TSS region transcription start site region 130114
Tssr130115 14 103346765 to 103346841 76 - TSS region transcription start site region 130115
Tssr127063 14 103346874 to 103346946 72 + TSS region transcription start site region 127063
Tssr127064 14 103347063 to 103347081 18 + TSS region transcription start site region 127064
Cpgi6815 14 103349544 to 103350286 742 CpG island CpG island 6815
Gm4654 14 103370465 to 103371446 981 - pseudogene predicted gene 4654
1700087I21Rik 14 103424905 to 103449867 24962 + lincRNA gene RIKEN cDNA 1700087I21 gene
Tssr127065 14 103438677 to 103438683 6 + TSS region transcription start site region 127065
Gm34907 14 103463924 to 103512619 48695 + lincRNA gene predicted gene, 34907
Tssr4513 14 103464382 to 103464407 25 + TSS region transcription start site region 4513
Tssr127066 14 103513304 to 103513324 20 + TSS region transcription start site region 127066
Tssr127067 14 103513328 to 103513377 49 + TSS region transcription start site region 127067
Scel 14 103513342 to 103612797 99455 + protein coding gene sciellin
Tssr127068 14 103513378 to 103513429 51 + TSS region transcription start site region 127068
Tssr127069 14 103513438 to 103513443 5 + TSS region transcription start site region 127069
Cpgi6816 14 103649885 to 103651339 1454 CpG island CpG island 6816
Tssr127070 14 103650208 to 103650243 35 + TSS region transcription start site region 127070
Slain1 14 103650228 to 103704907 54679 + protein coding gene SLAIN motif family, member 1
Tssr127071 14 103650250 to 103650257 7 + TSS region transcription start site region 127071
Gm22877 14 103650453 to 103650557 104 - miRNA gene predicted gene, 22877
Tssr130116 14 103651375 to 103651384 9 - TSS region transcription start site region 130116
Cpgi6817 14 103684358 to 103684703 345 CpG island CpG island 6817
Slain1os 14 103692983 to 103699432 6449 - antisense lncRNA gene SLAIN motif family, member 1, opposite strand
Tssr127072 14 103699512 to 103699523 11 + TSS region transcription start site region 127072
Cpgi6818 14 103702520 to 103702826 306 CpG island CpG island 6818
Gm35197 14 103719026 to 103867713 148687 + lncRNA gene predicted gene, 35197
Tssr127073 14 103719856 to 103719877 21 + TSS region transcription start site region 127073
2700054A04Rik 14 103776620 to 103777483 863 unclassified gene RIKEN cDNA 2700054A04 gene
Gm35116 14 103778919 to 103784419 5500 + lncRNA gene predicted gene, 35116
Ednrb 14 103814625 to 103844402 29777 - protein coding gene endothelin receptor type B
Tssr130117 14 103815750 to 103815763 13 - TSS region transcription start site region 130117
Tssr130118 14 103815867 to 103815872 5 - TSS region transcription start site region 130118
Tssr127074 14 103827200 to 103827209 9 + TSS region transcription start site region 127074
Cpgi6819 14 103843005 to 103844416 1411 CpG island CpG island 6819
Tssr130119 14 103843058 to 103843072 14 - TSS region transcription start site region 130119
Tssr130120 14 103843138 to 103843155 17 - TSS region transcription start site region 130120
Tssr130121 14 103843473 to 103843484 11 - TSS region transcription start site region 130121
Tssr130122 14 103843540 to 103843551 11 - TSS region transcription start site region 130122
Tssr130123 14 103843594 to 103843601 7 - TSS region transcription start site region 130123
Tssr130124 14 103843626 to 103843633 7 - TSS region transcription start site region 130124
Tssr130125 14 103843685 to 103843703 18 - TSS region transcription start site region 130125
Tssr130126 14 103843710 to 103843715 5 - TSS region transcription start site region 130126
Tssr130127 14 103843821 to 103843828 7 - TSS region transcription start site region 130127
Tssr130128 14 103844166 to 103844179 13 - TSS region transcription start site region 130128
Tssr130129 14 103844187 to 103844198 11 - TSS region transcription start site region 130129
Tssr130130 14 103844208 to 103844221 13 - TSS region transcription start site region 130130
Tssr130131 14 103844235 to 103844238 3 - TSS region transcription start site region 130131
Tssr130132 14 103844246 to 103844267 21 - TSS region transcription start site region 130132
Tssr130133 14 103844268 to 103844298 30 - TSS region transcription start site region 130133
Tssr130134 14 103844300 to 103844305 5 - TSS region transcription start site region 130134
Tssr130135 14 103844314 to 103844340 26 - TSS region transcription start site region 130135
Tssr130136 14 103844344 to 103844359 15 - TSS region transcription start site region 130136
Tssr130137 14 103844391 to 103844403 12 - TSS region transcription start site region 130137
Tssr130138 14 103844420 to 103844432 12 - TSS region transcription start site region 130138
Tssr130139 14 103844448 to 103844464 16 - TSS region transcription start site region 130139
4930518C04Rik 14 103898761 to 103900644 1883 + lncRNA gene RIKEN cDNA 4930518C04 gene
Tssr127075 14 103899479 to 103899488 9 + TSS region transcription start site region 127075
Gm37910 14 103948096 to 103949811 1715 + unclassified gene predicted gene, 37910
4930432J09Rik 14 103977628 to 104027142 49514 - lincRNA gene RIKEN cDNA 4930432J09 gene
Tssr130140 14 103998251 to 103998260 9 - TSS region transcription start site region 130140
Tssr130141 14 103998273 to 103998284 11 - TSS region transcription start site region 130141
Gm41238 14 104007205 to 104039607 32402 + lncRNA gene predicted gene, 41238
Gm41237 14 104032324 to 104034925 2601 - lncRNA gene predicted gene, 41237
D14Mit94 14 104096972 to 104097072 100 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 94
Tssr127076 14 104129058 to 104129059 1 + TSS region transcription start site region 127076
Gm35308 14 104151377 to 104153369 1992 + lncRNA gene predicted gene, 35308
Tssr127077 14 104190988 to 104191008 20 + TSS region transcription start site region 127077
D130079A08Rik 14 104288431 to 104459336 170905 - lincRNA gene RIKEN cDNA D130079A08 gene
Gm35362 14 104445370 to 104456277 10907 + lncRNA gene predicted gene, 35362
Tssr130142 14 104459333 to 104459337 4 - TSS region transcription start site region 130142
Tssr130143 14 104459483 to 104459486 3 - TSS region transcription start site region 130143
Cpgi6820 14 104460488 to 104460836 348 CpG island CpG island 6820
Cpgi6821 14 104460954 to 104461167 213 CpG island CpG island 6821
Pou4f1 14 104461676 to 104467999 6323 - protein coding gene POU domain, class 4, transcription factor 1
Tssr130144 14 104464656 to 104464662 6 - TSS region transcription start site region 130144
Cpgi6822 14 104465361 to 104468675 3314 CpG island CpG island 6822
Tssr130145 14 104467984 to 104468041 57 - TSS region transcription start site region 130145
Gm35623 14 104468198 to 104477234 9036 + lncRNA gene predicted gene, 35623
Cpgi6823 14 104472908 to 104473515 607 CpG island CpG island 6823
Cpgi6824 14 104473778 to 104474197 419 CpG island CpG island 6824
Rnf219 14 104477536 to 104522645 45109 - protein coding gene ring finger protein 219
Gm49205 14 104481491 to 104482283 792 + pseudogene predicted gene, 49205
Tssr130146 14 104521802 to 104521806 4 - TSS region transcription start site region 130146
Cpgi6825 14 104522044 to 104522841 797 CpG island CpG island 6825
Tssr130147 14 104522615 to 104522707 92 - TSS region transcription start site region 130147
Gm22021 14 104591094 to 104591200 106 + snRNA gene predicted gene, 22021
Gm35680 14 104600549 to 104607850 7301 + lncRNA gene predicted gene, 35680