Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:100694428-101734430

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59 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm22401 14 100700621 to 100700737 116 + miRNA gene predicted gene, 22401
Gm46483 14 100731111 to 100737204 6093 - lncRNA gene predicted gene, 46483
Cpgi6804 14 100750341 to 100750504 163 CpG island CpG island 6804
Gm23538 14 100760168 to 100760268 100 - snRNA gene predicted gene, 23538
Gm49239 14 100812187 to 100812478 291 + pseudogene predicted gene, 49239
Gm46481 14 100979465 to 101056086 76621 - lncRNA gene predicted gene, 46481
Tssr126899 14 101117158 to 101117160 2 + TSS region transcription start site region 126899
Prr30 14 101197690 to 101200330 2640 - protein coding gene proline rich 30
Tssr130022 14 101198908 to 101198919 11 - TSS region transcription start site region 130022
Tssr130023 14 101198950 to 101198959 9 - TSS region transcription start site region 130023
Tssr126900 14 101198995 to 101199038 43 + TSS region transcription start site region 126900
Tssr130024 14 101199064 to 101199073 9 - TSS region transcription start site region 130024
Tssr130025 14 101200314 to 101200323 9 - TSS region transcription start site region 130025
Tssr130026 14 101200349 to 101200418 69 - TSS region transcription start site region 130026
Gm34361 14 101201502 to 101267091 65589 + lncRNA gene predicted gene, 34361
Tssr126901 14 101214428 to 101214430 2 + TSS region transcription start site region 126901
Gm26173 14 101283067 to 101283202 135 + snoRNA gene predicted gene, 26173
D14Mit265 14 101337949 to 101338098 149 DNA segment DNA Segment, Chr 14 Massachusetts Institute of Technology 265
Hspd1-ps5 14 101343544 to 101345232 1688 + pseudogene heat shock protein 1 (chaperonin), pseudogene 5
Tssr126902 14 101379077 to 101379079 2 + TSS region transcription start site region 126902
Tbc1d4 14 101442360 to 101609191 166831 - protein coding gene TBC1 domain family, member 4
Tssr130027 14 101463082 to 101463110 28 - TSS region transcription start site region 130027
Tssr130028 14 101463179 to 101463189 10 - TSS region transcription start site region 130028
Tssr130029 14 101463209 to 101463230 21 - TSS region transcription start site region 130029
Tssr130030 14 101477231 to 101477240 9 - TSS region transcription start site region 130030
Tssr130031 14 101477255 to 101477317 62 - TSS region transcription start site region 130031
Tssr130032 14 101477411 to 101477420 9 - TSS region transcription start site region 130032
Tssr130033 14 101477440 to 101477452 12 - TSS region transcription start site region 130033
Tssr130034 14 101477487 to 101477514 27 - TSS region transcription start site region 130034
Tssr130035 14 101478946 to 101478958 12 - TSS region transcription start site region 130035
Cpgi6805 14 101507090 to 101507562 472 CpG island CpG island 6805
Tssr130036 14 101514026 to 101514031 5 - TSS region transcription start site region 130036
D14Mit8 14 101536132 to 101536335 203 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 8
Gm34417 14 101572528 to 101573014 486 - pseudogene predicted gene, 34417
Tssr130037 14 101573029 to 101573034 5 - TSS region transcription start site region 130037
Tssr130038 14 101594457 to 101594460 3 - TSS region transcription start site region 130038
D14Mit176 14 101601118 to 101601241 123 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 176
Cpgi6806 14 101607510 to 101609302 1792 CpG island CpG island 6806
Tssr130039 14 101608787 to 101608861 74 - TSS region transcription start site region 130039
Tssr130040 14 101609023 to 101609075 52 - TSS region transcription start site region 130040
Tssr130041 14 101609127 to 101609173 46 - TSS region transcription start site region 130041
D14Mit105 14 101621891 to 101622037 146 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 105
wrmod1 14 101622037 to 57942183 -43679854 QTL wobbler modifier 1
Commd6 14 101633766 to 101640471 6705 - protein coding gene COMM domain containing 6
Tssr130042 14 101637550 to 101637557 7 - TSS region transcription start site region 130042
Cpgi6807 14 101639947 to 101640745 798 CpG island CpG island 6807
Tssr130043 14 101640434 to 101640477 43 - TSS region transcription start site region 130043
Tssr130044 14 101640670 to 101640700 30 - TSS region transcription start site region 130044
Cpgi6808 14 101653518 to 101654750 1232 CpG island CpG island 6808
Uchl3 14 101653967 to 101696125 42158 + protein coding gene ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)
Tssr126903 14 101653980 to 101654048 68 + TSS region transcription start site region 126903
Tssr126904 14 101654176 to 101654201 25 + TSS region transcription start site region 126904
Gm18075 14 101702413 to 101703247 834 - pseudogene predicted gene, 18075
Gm49269 14 101711434 to 101711605 171 + pseudogene predicted gene, 49269
Cpgi6809 14 101729301 to 101730505 1204 CpG island CpG island 6809
Gm9922 14 101729380 to 101729814 434 - protein coding gene predicted gene 9922
Tssr130045 14 101729690 to 101729735 45 - TSS region transcription start site region 130045
Tssr126905 14 101729907 to 101729958 51 + TSS region transcription start site region 126905
Lmo7 14 101729957 to 101934710 204753 + protein coding gene LIM domain only 7