Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:100167219-100797260

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D14Mit106 14 100181105 to 100181417 312 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 106
Tssr130009 14 100189576 to 100189587 11 - TSS region transcription start site region 130009
Tssr130010 14 100208812 to 100208816 4 - TSS region transcription start site region 130010
4930517O19Rik 14 100213142 to 100245339 32197 + antisense lncRNA gene RIKEN cDNA 4930517O19 gene
Tssr126896 14 100213176 to 100213181 5 + TSS region transcription start site region 126896
Tssr126897 14 100213183 to 100213194 11 + TSS region transcription start site region 126897
Gm16260 14 100219486 to 100219789 303 + pseudogene predicted gene 16260
Tssr130011 14 100243050 to 100243057 7 - TSS region transcription start site region 130011
Tssr130012 14 100284219 to 100284222 3 - TSS region transcription start site region 130012
Cpgi6803 14 100284240 to 100286377 2137 CpG island CpG island 6803
Tssr130013 14 100284453 to 100284498 45 - TSS region transcription start site region 130013
Tssr130014 14 100284665 to 100284689 24 - TSS region transcription start site region 130014
Klf12 14 100284679 to 99870632 -414047 - protein coding gene Kruppel-like factor 12
Tssr130015 14 100284693 to 100284728 35 - TSS region transcription start site region 130015
Tssr130016 14 100284817 to 100284849 32 - TSS region transcription start site region 130016
Tssr130017 14 100284856 to 100284879 23 - TSS region transcription start site region 130017
Tssr130018 14 100284919 to 100284942 23 - TSS region transcription start site region 130018
Tssr130019 14 100284947 to 100284992 45 - TSS region transcription start site region 130019
Tssr126898 14 100285177 to 100285192 15 + TSS region transcription start site region 126898
Gm41231 14 100286165 to 100292575 6410 + lincRNA gene predicted gene, 41231
Gm34199 14 100417359 to 100492226 74867 + lncRNA gene predicted gene, 34199
Gm26367 14 100418483 to 100418614 131 + snoRNA gene predicted gene, 26367
6330576A10Rik 14 100459423 to 100479525 20102 + lincRNA gene RIKEN cDNA 6330576A10 gene
Tssr130020 14 100482219 to 100482260 41 - TSS region transcription start site region 130020
Gm9302 14 100519583 to 100520227 644 - pseudogene predicted gene 9302
Gm24345 14 100525244 to 100525367 123 - snoRNA gene predicted gene, 24345
Gm49237 14 100558632 to 100560670 2038 + lincRNA gene predicted gene, 49237
Tssr130021 14 100619356 to 100619363 7 - TSS region transcription start site region 130021
Gm49238 14 100655761 to 100662533 6772 + unclassified gene predicted gene, 49238
Gm22401 14 100700621 to 100700737 116 + miRNA gene predicted gene, 22401
Gm46483 14 100731111 to 100737204 6093 - lncRNA gene predicted gene, 46483
Cpgi6804 14 100750341 to 100750504 163 CpG island CpG island 6804
Gm23538 14 100760168 to 100760268 100 - snRNA gene predicted gene, 23538