Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:100164079-105934095

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523 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr130008 14 100165107 to 100165109 2 - TSS region transcription start site region 130008
D14Mit106 14 100181105 to 100181417 312 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 106
Tssr130009 14 100189576 to 100189587 11 - TSS region transcription start site region 130009
Tssr130010 14 100208812 to 100208816 4 - TSS region transcription start site region 130010
4930517O19Rik 14 100213142 to 100245339 32197 + antisense lncRNA gene RIKEN cDNA 4930517O19 gene
Tssr126896 14 100213176 to 100213181 5 + TSS region transcription start site region 126896
Tssr126897 14 100213183 to 100213194 11 + TSS region transcription start site region 126897
Gm16260 14 100219486 to 100219789 303 + pseudogene predicted gene 16260
Tssr130011 14 100243050 to 100243057 7 - TSS region transcription start site region 130011
Tssr130012 14 100284219 to 100284222 3 - TSS region transcription start site region 130012
Cpgi6803 14 100284240 to 100286377 2137 CpG island CpG island 6803
Tssr130013 14 100284453 to 100284498 45 - TSS region transcription start site region 130013
Tssr130014 14 100284665 to 100284689 24 - TSS region transcription start site region 130014
Klf12 14 100284679 to 99870632 -414047 - protein coding gene Kruppel-like factor 12
Tssr130015 14 100284693 to 100284728 35 - TSS region transcription start site region 130015
Tssr130016 14 100284817 to 100284849 32 - TSS region transcription start site region 130016
Tssr130017 14 100284856 to 100284879 23 - TSS region transcription start site region 130017
Tssr130018 14 100284919 to 100284942 23 - TSS region transcription start site region 130018
Tssr130019 14 100284947 to 100284992 45 - TSS region transcription start site region 130019
Tssr126898 14 100285177 to 100285192 15 + TSS region transcription start site region 126898
Gm41231 14 100286165 to 100292575 6410 + lincRNA gene predicted gene, 41231
Gm34199 14 100417359 to 100492226 74867 + lncRNA gene predicted gene, 34199
Gm26367 14 100418483 to 100418614 131 + snoRNA gene predicted gene, 26367
6330576A10Rik 14 100459423 to 100479525 20102 + lincRNA gene RIKEN cDNA 6330576A10 gene
Tssr130020 14 100482219 to 100482260 41 - TSS region transcription start site region 130020
Gm9302 14 100519583 to 100520227 644 - pseudogene predicted gene 9302
Gm24345 14 100525244 to 100525367 123 - snoRNA gene predicted gene, 24345
Gm49237 14 100558632 to 100560670 2038 + lincRNA gene predicted gene, 49237
Tssr130021 14 100619356 to 100619363 7 - TSS region transcription start site region 130021
Gm49238 14 100655761 to 100662533 6772 + unclassified gene predicted gene, 49238
Gm22401 14 100700621 to 100700737 116 + miRNA gene predicted gene, 22401
Gm46483 14 100731111 to 100737204 6093 - lncRNA gene predicted gene, 46483
Cpgi6804 14 100750341 to 100750504 163 CpG island CpG island 6804
Gm23538 14 100760168 to 100760268 100 - snRNA gene predicted gene, 23538
Gm49239 14 100812187 to 100812478 291 + pseudogene predicted gene, 49239
Gm46481 14 100979465 to 101056086 76621 - lncRNA gene predicted gene, 46481
Tssr126899 14 101117158 to 101117160 2 + TSS region transcription start site region 126899
Prr30 14 101197690 to 101200330 2640 - protein coding gene proline rich 30
Tssr130022 14 101198908 to 101198919 11 - TSS region transcription start site region 130022
Tssr130023 14 101198950 to 101198959 9 - TSS region transcription start site region 130023
Tssr126900 14 101198995 to 101199038 43 + TSS region transcription start site region 126900
Tssr130024 14 101199064 to 101199073 9 - TSS region transcription start site region 130024
Tssr130025 14 101200314 to 101200323 9 - TSS region transcription start site region 130025
Tssr130026 14 101200349 to 101200418 69 - TSS region transcription start site region 130026
Gm34361 14 101201502 to 101267091 65589 + lncRNA gene predicted gene, 34361
Tssr126901 14 101214428 to 101214430 2 + TSS region transcription start site region 126901
Gm26173 14 101283067 to 101283202 135 + snoRNA gene predicted gene, 26173
D14Mit265 14 101337949 to 101338098 149 DNA segment DNA Segment, Chr 14 Massachusetts Institute of Technology 265
Hspd1-ps5 14 101343544 to 101345232 1688 + pseudogene heat shock protein 1 (chaperonin), pseudogene 5
Tssr126902 14 101379077 to 101379079 2 + TSS region transcription start site region 126902
Tbc1d4 14 101442360 to 101609191 166831 - protein coding gene TBC1 domain family, member 4
Tssr130027 14 101463082 to 101463110 28 - TSS region transcription start site region 130027
Tssr130028 14 101463179 to 101463189 10 - TSS region transcription start site region 130028
Tssr130029 14 101463209 to 101463230 21 - TSS region transcription start site region 130029
Tssr130030 14 101477231 to 101477240 9 - TSS region transcription start site region 130030
Tssr130031 14 101477255 to 101477317 62 - TSS region transcription start site region 130031
Tssr130032 14 101477411 to 101477420 9 - TSS region transcription start site region 130032
Tssr130033 14 101477440 to 101477452 12 - TSS region transcription start site region 130033
Tssr130034 14 101477487 to 101477514 27 - TSS region transcription start site region 130034
Tssr130035 14 101478946 to 101478958 12 - TSS region transcription start site region 130035
Cpgi6805 14 101507090 to 101507562 472 CpG island CpG island 6805
Tssr130036 14 101514026 to 101514031 5 - TSS region transcription start site region 130036
D14Mit8 14 101536132 to 101536335 203 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 8
Gm34417 14 101572528 to 101573014 486 - pseudogene predicted gene, 34417
Tssr130037 14 101573029 to 101573034 5 - TSS region transcription start site region 130037
Tssr130038 14 101594457 to 101594460 3 - TSS region transcription start site region 130038
D14Mit176 14 101601118 to 101601241 123 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 176
Cpgi6806 14 101607510 to 101609302 1792 CpG island CpG island 6806
Tssr130039 14 101608787 to 101608861 74 - TSS region transcription start site region 130039
Tssr130040 14 101609023 to 101609075 52 - TSS region transcription start site region 130040
Tssr130041 14 101609127 to 101609173 46 - TSS region transcription start site region 130041
D14Mit105 14 101621891 to 101622037 146 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 105
wrmod1 14 101622037 to 57942183 -43679854 QTL wobbler modifier 1
Commd6 14 101633766 to 101640471 6705 - protein coding gene COMM domain containing 6
Tssr130042 14 101637550 to 101637557 7 - TSS region transcription start site region 130042
Cpgi6807 14 101639947 to 101640745 798 CpG island CpG island 6807
Tssr130043 14 101640434 to 101640477 43 - TSS region transcription start site region 130043
Tssr130044 14 101640670 to 101640700 30 - TSS region transcription start site region 130044
Cpgi6808 14 101653518 to 101654750 1232 CpG island CpG island 6808
Uchl3 14 101653967 to 101696125 42158 + protein coding gene ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)
Tssr126903 14 101653980 to 101654048 68 + TSS region transcription start site region 126903
Tssr126904 14 101654176 to 101654201 25 + TSS region transcription start site region 126904
Gm18075 14 101702413 to 101703247 834 - pseudogene predicted gene, 18075
Gm49269 14 101711434 to 101711605 171 + pseudogene predicted gene, 49269
Cpgi6809 14 101729301 to 101730505 1204 CpG island CpG island 6809
Gm9922 14 101729380 to 101729814 434 - protein coding gene predicted gene 9922
Tssr130045 14 101729690 to 101729735 45 - TSS region transcription start site region 130045
Tssr126905 14 101729907 to 101729958 51 + TSS region transcription start site region 126905
Lmo7 14 101729957 to 101934710 204753 + protein coding gene LIM domain only 7
Tssr126906 14 101823071 to 101823090 19 + TSS region transcription start site region 126906
Tssr126907 14 101838501 to 101838515 14 + TSS region transcription start site region 126907
Tssr126908 14 101840291 to 101840311 20 + TSS region transcription start site region 126908
Tssr126909 14 101840323 to 101840328 5 + TSS region transcription start site region 126909
Tssr126910 14 101840333 to 101840356 23 + TSS region transcription start site region 126910
Tssr126911 14 101840361 to 101840372 11 + TSS region transcription start site region 126911
Tssr126912 14 101840454 to 101840465 11 + TSS region transcription start site region 126912
Tssr126913 14 101840481 to 101840492 11 + TSS region transcription start site region 126913
Tssr126914 14 101840501 to 101840554 53 + TSS region transcription start site region 126914
Tssr126915 14 101840558 to 101840569 11 + TSS region transcription start site region 126915
Tssr126916 14 101840587 to 101840598 11 + TSS region transcription start site region 126916
Tssr126917 14 101840602 to 101840677 75 + TSS region transcription start site region 126917
Tssr126918 14 101840707 to 101840736 29 + TSS region transcription start site region 126918
Tssr126919 14 101840755 to 101840768 13 + TSS region transcription start site region 126919
Tssr126920 14 101840794 to 101840809 15 + TSS region transcription start site region 126920
Tssr126921 14 101840811 to 101840839 28 + TSS region transcription start site region 126921
Tssr126922 14 101840841 to 101840857 16 + TSS region transcription start site region 126922
Tssr126923 14 101840874 to 101840884 10 + TSS region transcription start site region 126923
Tssr126924 14 101840905 to 101840906 1 + TSS region transcription start site region 126924
Tssr130046 14 101841662 to 101841667 5 - TSS region transcription start site region 130046
Tssr126925 14 101869369 to 101869405 36 + TSS region transcription start site region 126925
Tssr126926 14 101869418 to 101869432 14 + TSS region transcription start site region 126926
Tssr126927 14 101884038 to 101884045 7 + TSS region transcription start site region 126927
Tssr126928 14 101884046 to 101884125 79 + TSS region transcription start site region 126928
Tssr126929 14 101884127 to 101884136 9 + TSS region transcription start site region 126929
Tssr126930 14 101884314 to 101884327 13 + TSS region transcription start site region 126930
Tssr126931 14 101886885 to 101886896 11 + TSS region transcription start site region 126931
Tssr126932 14 101887469 to 101887480 11 + TSS region transcription start site region 126932
Tssr126933 14 101891310 to 101891314 4 + TSS region transcription start site region 126933
Tssr130047 14 101892226 to 101892234 8 - TSS region transcription start site region 130047
Tssr130048 14 101892259 to 101892279 20 - TSS region transcription start site region 130048
Tssr130049 14 101892334 to 101892336 2 - TSS region transcription start site region 130049
Tssr130050 14 101892644 to 101892666 22 - TSS region transcription start site region 130050
Tssr126934 14 101894023 to 101894037 14 + TSS region transcription start site region 126934
Tssr126935 14 101896400 to 101896405 5 + TSS region transcription start site region 126935
Tgq25 14 101896632 to 101896632 0 QTL triglyceride QTL 25
Tssr126936 14 101898440 to 101898446 6 + TSS region transcription start site region 126936
Tssr126937 14 101898511 to 101898525 14 + TSS region transcription start site region 126937
Tssr126938 14 101898530 to 101898548 18 + TSS region transcription start site region 126938
Tssr126939 14 101898558 to 101898567 9 + TSS region transcription start site region 126939
Tssr126940 14 101898586 to 101898603 17 + TSS region transcription start site region 126940
Tssr126941 14 101899382 to 101899385 3 + TSS region transcription start site region 126941
Tssr126942 14 101900161 to 101900183 22 + TSS region transcription start site region 126942
Tssr126943 14 101910760 to 101910803 43 + TSS region transcription start site region 126943
Tssr126944 14 101910817 to 101910822 5 + TSS region transcription start site region 126944
Tssr126945 14 101919094 to 101919098 4 + TSS region transcription start site region 126945
Tssr126946 14 101933999 to 101934036 37 + TSS region transcription start site region 126946
Gm5854 14 101981991 to 101982763 772 - pseudogene predicted gene 5854
Tssr130051 14 102072328 to 102072344 16 - TSS region transcription start site region 130051
Gm41232 14 102174407 to 102185727 11320 + lncRNA gene predicted gene, 41232
D14Mit145.1 14 102182847 to 102183022 175 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 145.1
D14Mit145 14 102183074 to 102183213 139 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 145
D14Jpk2 14 102183114 to 102183232 118 DNA segment DNA segment, Chr 14, Japan, Kominami 2
Tssr4507 14 102225546 to 102225548 2 + TSS region transcription start site region 4507
D14Mit163 14 102308798 to 102308945 147 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 163
D14Mit164 14 102311911 to 102311991 80 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 164
Gm22347 14 102329530 to 102329661 131 - snoRNA gene predicted gene, 22347
D14Mit38 14 102393881 to 102394022 141 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 38
Gm49292 14 102437023 to 102464994 27971 + lincRNA gene predicted gene, 49292
Gm9448 14 102489652 to 102490165 513 - pseudogene predicted gene 9448
Tssr126947 14 102515252 to 102515255 3 + TSS region transcription start site region 126947
D14Mit269 14 102544095 to 102544213 118 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology 269
Gm41233 14 102565711 to 102570306 4595 - lncRNA gene predicted gene, 41233
Tssr126948 14 102720810 to 102720815 5 + TSS region transcription start site region 126948
Gm41234 14 102791013 to 102794944 3931 - lncRNA gene predicted gene, 41234
Gm23764 14 102806099 to 102806146 47 + rRNA gene predicted gene, 23764
Tssr4508 14 102811195 to 102811205 10 - TSS region transcription start site region 4508
Gm34589 14 102818164 to 102834758 16594 - lncRNA gene predicted gene, 34589
Tssr4509 14 102828149 to 102828163 14 - TSS region transcription start site region 4509
Tssr130052 14 102828183 to 102828198 15 - TSS region transcription start site region 130052
Kctd12 14 102976581 to 102982637 6056 - protein coding gene potassium channel tetramerisation domain containing 12
Tssr130053 14 102977857 to 102977926 69 - TSS region transcription start site region 130053
Tssr130054 14 102977945 to 102977971 26 - TSS region transcription start site region 130054
Tssr130055 14 102978126 to 102978137 11 - TSS region transcription start site region 130055
Gm26778 14 102978220 to 102982528 4308 + lincRNA gene predicted gene, 26778
Tssr130056 14 102978558 to 102978571 13 - TSS region transcription start site region 130056
Tssr130057 14 102978663 to 102978675 12 - TSS region transcription start site region 130057
Tssr130058 14 102979746 to 102979766 20 - TSS region transcription start site region 130058
Tssr130059 14 102979774 to 102979797 23 - TSS region transcription start site region 130059
Tssr126949 14 102980108 to 102980127 19 + TSS region transcription start site region 126949
Tssr130060 14 102980516 to 102980523 7 - TSS region transcription start site region 130060
Cpgi6810 14 102981049 to 102983266 2217 CpG island CpG island 6810
Tssr126950 14 102981296 to 102981326 30 + TSS region transcription start site region 126950
Tssr126951 14 102981367 to 102981392 25 + TSS region transcription start site region 126951
Tssr126952 14 102981435 to 102981470 35 + TSS region transcription start site region 126952
Tssr130061 14 102981458 to 102981461 3 - TSS region transcription start site region 130061
Mir5130 14 102982549 to 102982632 83 - miRNA gene microRNA 5130
Tssr130062 14 102982630 to 102982645 15 - TSS region transcription start site region 130062
Tssr130063 14 102982695 to 102982704 9 - TSS region transcription start site region 130063
Tssr126953 14 102982927 to 102982931 4 + TSS region transcription start site region 126953
4933432I03Rik 14 102987412 to 103033803 46391 - lincRNA gene RIKEN cDNA 4933432I03 gene
Tssr130064 14 103007764 to 103007771 7 - TSS region transcription start site region 130064
Tssr130065 14 103007854 to 103007861 7 - TSS region transcription start site region 130065
Tssr126954 14 103008128 to 103008143 15 + TSS region transcription start site region 126954
Tssr126955 14 103008239 to 103008249 10 + TSS region transcription start site region 126955
Tssr126956 14 103010206 to 103010215 9 + TSS region transcription start site region 126956
Rpl17-ps7 14 103010246 to 103010786 540 + pseudogene ribosomal protein L17, pseudogene 7
Tssr126957 14 103012824 to 103012844 20 + TSS region transcription start site region 126957
Tssr126958 14 103012870 to 103012887 17 + TSS region transcription start site region 126958
Tssr126959 14 103012893 to 103012902 9 + TSS region transcription start site region 126959
Gm34643 14 103012908 to 103024457 11549 + lincRNA gene predicted gene, 34643
Tssr126960 14 103012931 to 103012967 36 + TSS region transcription start site region 126960
Tssr126961 14 103014426 to 103014462 36 + TSS region transcription start site region 126961
Tssr126962 14 103014485 to 103014495 10 + TSS region transcription start site region 126962
Tssr126963 14 103014499 to 103014519 20 + TSS region transcription start site region 126963
Tssr130066 14 103014920 to 103014974 54 - TSS region transcription start site region 130066
Tssr126964 14 103015116 to 103015124 8 + TSS region transcription start site region 126964
Tssr4510 14 103017032 to 103017065 33 - TSS region transcription start site region 4510
Tssr130067 14 103017127 to 103017163 36 - TSS region transcription start site region 130067
Tssr126965 14 103017355 to 103017363 8 + TSS region transcription start site region 126965
D14Mit93 14 103022658 to 103022802 144 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 93