Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:99442399-99942529

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Map1b 13 99421446 to 99516540 95094 - protein coding gene microtubule-associated protein 1B
Tssr123746 13 99444365 to 99444370 5 - TSS region transcription start site region 123746
Tssr123747 13 99444422 to 99444441 19 - TSS region transcription start site region 123747
Tssr123748 13 99444443 to 99444488 45 - TSS region transcription start site region 123748
Tssr123749 13 99444527 to 99444552 25 - TSS region transcription start site region 123749
Tssr123750 13 99444555 to 99444562 7 - TSS region transcription start site region 123750
Tssr123751 13 99447346 to 99447393 47 - TSS region transcription start site region 123751
Tssr123752 13 99447523 to 99447530 7 - TSS region transcription start site region 123752
Tssr123753 13 99447585 to 99447622 37 - TSS region transcription start site region 123753
Tssr123754 13 99447625 to 99447644 19 - TSS region transcription start site region 123754
Tssr123755 13 99470327 to 99470376 49 - TSS region transcription start site region 123755
5330431K02Rik 13 99502477 to 99504439 1962 - unclassified gene RIKEN cDNA 5330431K02 gene
Tssr123756 13 99513615 to 99513619 4 - TSS region transcription start site region 123756
Cpgi6023 13 99514875 to 99515541 666 CpG island CpG island 6023
Cpgi6024 13 99515860 to 99516914 1054 CpG island CpG island 6024
Tssr123757 13 99516512 to 99516523 11 - TSS region transcription start site region 123757
Tssr123758 13 99516537 to 99516579 42 - TSS region transcription start site region 123758
Gm26559 13 99516629 to 99521760 5131 + bidirectional promoter lncRNA gene predicted gene, 26559
Tssr123759 13 99516666 to 99516677 11 - TSS region transcription start site region 123759
Tssr120835 13 99550940 to 99550945 5 + TSS region transcription start site region 120835
Gm47158 13 99561442 to 99561919 477 + pseudogene predicted gene, 47158
Tssr123760 13 99585664 to 99585667 3 - TSS region transcription start site region 123760
D13Mit36 13 99603460 to 99603598 138 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 36
Ses10 13 99603460 to 99603598 138 QTL salmonella enteritidis susceptibility 10
Cpgi6025 13 99630363 to 99630771 408 CpG island CpG island 6025
Tssr120836 13 99641951 to 99641957 6 + TSS region transcription start site region 120836
1700012J22Rik 13 99641974 to 99642803 829 + unclassified gene RIKEN cDNA 1700012J22 gene
Tssr120837 13 99641983 to 99641992 9 + TSS region transcription start site region 120837
Gm24471 13 99692399 to 99692529 130 - snoRNA gene predicted gene, 24471
Cpgi6026 13 99692983 to 99693248 265 CpG island CpG island 6026
D13Die4 13 99791448 to 99791679 231 DNA segment DNA segment, Chr 13, Dietrich 4
Tssr123761 13 99853254 to 99853258 4 - TSS region transcription start site region 123761
Cartpt 13 99898483 to 99900683 2200 - protein coding gene CART prepropeptide
Cpgi6027 13 99899934 to 99901021 1087 CpG island CpG island 6027
Tssr123762 13 99900645 to 99900669 24 - TSS region transcription start site region 123762
Tssr123763 13 99900786 to 99900789 3 - TSS region transcription start site region 123763
Gm41039 13 99933395 to 99948322 14927 - lncRNA gene predicted gene, 41039
D13Die21 13 99936248 to 99936368 120 DNA segment DNA segment, Chr 13, Dietrich 21
Tssr120838 13 99939579 to 99939613 34 + TSS region transcription start site region 120838
Sod1m 13 110563377 to 99603460 -10959917 QTL superoxide dismutase 1, soluble, modifier