Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:99254775-99434806

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77 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ptcd2 13 99319649 to 99344678 25029 - protein coding gene pentatricopeptide repeat domain 2
Cpgi6020 13 99344303 to 99345021 718 CpG island CpG island 6020
Tssr123676 13 99344620 to 99344631 11 - TSS region transcription start site region 123676
Tssr123677 13 99344652 to 99344706 54 - TSS region transcription start site region 123677
Tssr120829 13 99344775 to 99344806 31 + TSS region transcription start site region 120829
Mrps27 13 99344786 to 99415562 70776 + protein coding gene mitochondrial ribosomal protein S27
Cpgi6021 13 99353079 to 99353574 495 CpG island CpG island 6021
Gm41038 13 99354717 to 99362958 8241 + lncRNA gene predicted gene, 41038
Tssr120830 13 99369758 to 99369764 6 + TSS region transcription start site region 120830
Gm41037 13 99396390 to 99409815 13425 - lncRNA gene predicted gene, 41037
6430562O15Rik 13 99410836 to 99412826 1990 - lncRNA gene RIKEN cDNA 6430562O15 gene
Tssr123678 13 99411920 to 99411934 14 - TSS region transcription start site region 123678
Tssr123679 13 99412816 to 99412839 23 - TSS region transcription start site region 123679
Tssr120831 13 99415153 to 99415157 4 + TSS region transcription start site region 120831
Map1b 13 99421446 to 99516540 95094 - protein coding gene microtubule-associated protein 1B
Tssr123680 13 99421723 to 99421740 17 - TSS region transcription start site region 123680
Tssr123681 13 99422197 to 99422209 12 - TSS region transcription start site region 123681
Tssr123682 13 99422654 to 99422673 19 - TSS region transcription start site region 123682
Tssr123683 13 99422692 to 99422704 12 - TSS region transcription start site region 123683
Tssr123684 13 99422855 to 99422867 12 - TSS region transcription start site region 123684
Tssr123685 13 99422875 to 99422887 12 - TSS region transcription start site region 123685
Tssr123686 13 99422890 to 99422904 14 - TSS region transcription start site region 123686
Tssr123687 13 99422912 to 99422927 15 - TSS region transcription start site region 123687
Tssr123688 13 99423570 to 99423593 23 - TSS region transcription start site region 123688
Tssr123689 13 99424412 to 99424416 4 - TSS region transcription start site region 123689
Tssr123690 13 99425131 to 99425146 15 - TSS region transcription start site region 123690
Tssr123691 13 99425220 to 99425236 16 - TSS region transcription start site region 123691
Tssr120832 13 99425371 to 99425402 31 + TSS region transcription start site region 120832
Tssr123692 13 99425418 to 99425440 22 - TSS region transcription start site region 123692
Tssr123693 13 99425827 to 99425854 27 - TSS region transcription start site region 123693
Tssr123694 13 99425912 to 99425927 15 - TSS region transcription start site region 123694
Tssr123695 13 99427319 to 99427338 19 - TSS region transcription start site region 123695
Tssr4149 13 99429592 to 99429635 43 + TSS region transcription start site region 4149
Tssr123696 13 99429891 to 99429901 10 - TSS region transcription start site region 123696
Tssr123697 13 99430081 to 99430092 11 - TSS region transcription start site region 123697
Tssr123698 13 99430212 to 99430242 30 - TSS region transcription start site region 123698
Tssr123699 13 99430303 to 99430326 23 - TSS region transcription start site region 123699
Tssr123700 13 99430328 to 99430373 45 - TSS region transcription start site region 123700
Tssr123701 13 99430386 to 99430398 12 - TSS region transcription start site region 123701
Tssr123702 13 99430406 to 99430417 11 - TSS region transcription start site region 123702
Tssr123703 13 99430458 to 99430469 11 - TSS region transcription start site region 123703
Tssr123704 13 99430509 to 99430525 16 - TSS region transcription start site region 123704
Tssr123705 13 99430817 to 99430826 9 - TSS region transcription start site region 123705
Tssr123706 13 99431035 to 99431053 18 - TSS region transcription start site region 123706
Tssr123707 13 99431224 to 99431245 21 - TSS region transcription start site region 123707
Tssr123708 13 99431432 to 99431443 11 - TSS region transcription start site region 123708
Tssr123709 13 99431601 to 99431615 14 - TSS region transcription start site region 123709
Tssr123710 13 99432808 to 99432823 15 - TSS region transcription start site region 123710
Tssr123711 13 99433014 to 99433027 13 - TSS region transcription start site region 123711
Cpgi6022 13 99433235 to 99433536 301 CpG island CpG island 6022
Tssr123712 13 99433244 to 99433253 9 - TSS region transcription start site region 123712
Tssr123713 13 99433459 to 99433468 9 - TSS region transcription start site region 123713
Tssr123714 13 99433499 to 99433520 21 - TSS region transcription start site region 123714
Tssr123715 13 99433532 to 99433539 7 - TSS region transcription start site region 123715
Tssr123716 13 99433596 to 99433607 11 - TSS region transcription start site region 123716
Tssr123717 13 99434001 to 99434006 5 - TSS region transcription start site region 123717
Tssr123718 13 99434095 to 99434125 30 - TSS region transcription start site region 123718
Tssr120833 13 99434148 to 99434183 35 + TSS region transcription start site region 120833
Tssr123719 13 99434195 to 99434204 9 - TSS region transcription start site region 123719
Tssr4150 13 99434212 to 99434264 52 + TSS region transcription start site region 4150
Tssr123720 13 99434216 to 99434235 19 - TSS region transcription start site region 123720
Tssr123721 13 99434250 to 99434274 24 - TSS region transcription start site region 123721
Tssr123722 13 99434281 to 99434294 13 - TSS region transcription start site region 123722
Tssr123723 13 99434301 to 99434313 12 - TSS region transcription start site region 123723
Tssr123724 13 99434317 to 99434334 17 - TSS region transcription start site region 123724
Tssr123725 13 99434338 to 99434400 62 - TSS region transcription start site region 123725
Tssr123726 13 99434410 to 99434433 23 - TSS region transcription start site region 123726
Tssr123727 13 99434441 to 99434456 15 - TSS region transcription start site region 123727
Tssr123728 13 99434464 to 99434475 11 - TSS region transcription start site region 123728
Tssr123729 13 99434480 to 99434542 62 - TSS region transcription start site region 123729
Tssr123730 13 99434547 to 99434556 9 - TSS region transcription start site region 123730
Tssr123731 13 99434561 to 99434570 9 - TSS region transcription start site region 123731
Tssr123732 13 99434571 to 99434603 32 - TSS region transcription start site region 123732
Tssr123733 13 99434608 to 99434618 10 - TSS region transcription start site region 123733
Tssr123734 13 99434636 to 99434648 12 - TSS region transcription start site region 123734
Tssr123735 13 99434654 to 99434663 9 - TSS region transcription start site region 123735
Tssr4151 13 99434722 to 99434725 3 - TSS region transcription start site region 4151