Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:99072898-99422909

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm35493 13 99073062 to 99074034 972 + lncRNA gene predicted gene, 35493
2310020H05Rik 13 99076528 to 99087921 11393 - lincRNA gene RIKEN cDNA 2310020H05 gene
Tssr123675 13 99087902 to 99087926 24 - TSS region transcription start site region 123675
Tssr120819 13 99100698 to 99100719 21 + TSS region transcription start site region 120819
Gm807 13 99100706 to 99107580 6874 + lincRNA gene predicted gene 807
Gm45938 13 99110537 to 99122458 11921 + lncRNA gene predicted gene, 45938
Cpgi6017 13 99152615 to 99152841 226 CpG island CpG island 6017
Gm41036 13 99173120 to 99176459 3339 - lncRNA gene predicted gene, 41036
Tssr120820 13 99184685 to 99184726 41 + TSS region transcription start site region 120820
Tssr120821 13 99184733 to 99184755 22 + TSS region transcription start site region 120821
Zfp366 13 99184823 to 99247032 62209 + protein coding gene zinc finger protein 366
Tssr4148 13 99206176 to 99206179 3 + TSS region transcription start site region 4148
D13Mit109 13 99220877 to 99220989 112 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 109
Cpgi6018 13 99228552 to 99229572 1020 CpG island CpG island 6018
Tssr120822 13 99230271 to 99230275 4 + TSS region transcription start site region 120822
D13Dcr14 13 99233183 to 99233278 95 DNA segment DNA Segment, Chr 13, Derry C. Roopenian 14
Cpgi6019 13 99246114 to 99246270 156 CpG island CpG island 6019
Tssr120823 13 99247682 to 99247693 11 + TSS region transcription start site region 120823
Tssr120824 13 99247695 to 99247707 12 + TSS region transcription start site region 120824
Tssr120825 13 99247776 to 99247792 16 + TSS region transcription start site region 120825
Tssr120826 13 99247828 to 99247882 54 + TSS region transcription start site region 120826
Tssr120827 13 99247898 to 99247909 11 + TSS region transcription start site region 120827
Tssr120828 13 99248012 to 99248029 17 + TSS region transcription start site region 120828
Ptcd2 13 99319649 to 99344678 25029 - protein coding gene pentatricopeptide repeat domain 2
Cpgi6020 13 99344303 to 99345021 718 CpG island CpG island 6020
Tssr123676 13 99344620 to 99344631 11 - TSS region transcription start site region 123676
Tssr123677 13 99344652 to 99344706 54 - TSS region transcription start site region 123677
Tssr120829 13 99344775 to 99344806 31 + TSS region transcription start site region 120829
Mrps27 13 99344786 to 99415562 70776 + protein coding gene mitochondrial ribosomal protein S27
Cpgi6021 13 99353079 to 99353574 495 CpG island CpG island 6021
Gm41038 13 99354717 to 99362958 8241 + lncRNA gene predicted gene, 41038
Tssr120830 13 99369758 to 99369764 6 + TSS region transcription start site region 120830
Gm41037 13 99396390 to 99409815 13425 - lncRNA gene predicted gene, 41037
6430562O15Rik 13 99410836 to 99412826 1990 - lncRNA gene RIKEN cDNA 6430562O15 gene
Tssr123678 13 99411920 to 99411934 14 - TSS region transcription start site region 123678
Tssr123679 13 99412816 to 99412839 23 - TSS region transcription start site region 123679
Tssr120831 13 99415153 to 99415157 4 + TSS region transcription start site region 120831
Map1b 13 99421446 to 99516540 95094 - protein coding gene microtubule-associated protein 1B
Tssr123680 13 99421723 to 99421740 17 - TSS region transcription start site region 123680
Tssr123681 13 99422197 to 99422209 12 - TSS region transcription start site region 123681
Tssr123682 13 99422654 to 99422673 19 - TSS region transcription start site region 123682
Tssr123683 13 99422692 to 99422704 12 - TSS region transcription start site region 123683
Tssr123684 13 99422855 to 99422867 12 - TSS region transcription start site region 123684
Tssr123685 13 99422875 to 99422887 12 - TSS region transcription start site region 123685
Tssr123686 13 99422890 to 99422904 14 - TSS region transcription start site region 123686