Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:98844558-99124571

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tnpo1 13 98839019 to 98926384 87365 - protein coding gene transportin 1
Tssr123660 13 98846802 to 98846810 8 - TSS region transcription start site region 123660
8030448K23Rik 13 98871163 to 98874491 3328 unclassified gene RIKEN cDNA 8030448K23 gene
Tssr123661 13 98872203 to 98872225 22 - TSS region transcription start site region 123661
Tssr123662 13 98874854 to 98874858 4 - TSS region transcription start site region 123662
Tssr123663 13 98877878 to 98877882 4 - TSS region transcription start site region 123663
Cpgi6014 13 98890082 to 98891224 1142 CpG island CpG island 6014
Tssr123664 13 98890787 to 98890805 18 - TSS region transcription start site region 123664
Tssr123665 13 98890974 to 98891035 61 - TSS region transcription start site region 123665
Tssr123666 13 98891036 to 98891063 27 - TSS region transcription start site region 123666
Tssr120817 13 98904195 to 98904199 4 + TSS region transcription start site region 120817
Gm5453 13 98904224 to 98904670 446 + pseudogene predicted gene 5453
Cpgi6015 13 98925613 to 98926930 1317 CpG island CpG island 6015
Tssr123667 13 98925613 to 98925624 11 - TSS region transcription start site region 123667
Tssr123668 13 98926296 to 98926308 12 - TSS region transcription start site region 123668
Tssr123669 13 98926312 to 98926357 45 - TSS region transcription start site region 123669
Tssr123670 13 98926360 to 98926373 13 - TSS region transcription start site region 123670
Tssr123671 13 98926374 to 98926389 15 - TSS region transcription start site region 123671
Tssr123672 13 98926636 to 98926688 52 - TSS region transcription start site region 123672
Gm35215 13 98936763 to 98945916 9153 - lincRNA gene predicted gene, 35215
Gm47052 13 98973378 to 98973742 364 + pseudogene predicted gene, 47052
1700024P04Rik 13 98984090 to 98984565 475 - protein coding gene RIKEN cDNA 1700024P04 gene
Tssr123673 13 98984558 to 98984571 13 - TSS region transcription start site region 123673
Tssr123674 13 98984601 to 98984605 4 - TSS region transcription start site region 123674
Gm41035 13 98987600 to 98990984 3384 - protein coding gene predicted gene, 41035
Gm35279 13 98994151 to 98997418 3267 + lincRNA gene predicted gene, 35279
Tssr120818 13 99007081 to 99007086 5 + TSS region transcription start site region 120818
A930014D07Rik 13 99007099 to 99021695 14596 + lincRNA gene RIKEN cDNA A930014D07 gene
Cpgi6016 13 99028453 to 99028604 151 CpG island CpG island 6016
Gm47057 13 99034309 to 99034848 539 - pseudogene predicted gene, 47057
Gm24733 13 99040398 to 99040650 252 - unclassified non-coding RNA gene predicted gene, 24733
Gm35493 13 99073062 to 99074034 972 + lncRNA gene predicted gene, 35493
2310020H05Rik 13 99076528 to 99087921 11393 - lincRNA gene RIKEN cDNA 2310020H05 gene
Tssr123675 13 99087902 to 99087926 24 - TSS region transcription start site region 123675
Tssr120819 13 99100698 to 99100719 21 + TSS region transcription start site region 120819
Gm807 13 99100706 to 99107580 6874 + lincRNA gene predicted gene 807
Gm45938 13 99110537 to 99122458 11921 + lncRNA gene predicted gene, 45938