Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:9880784-10475807

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14 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr118334 13 9883298 to 9883308 10 + TSS region transcription start site region 118334
Gm47406 13 9892910 to 9894050 1140 + pseudogene predicted gene, 47406
D13Mit215 13 10046277 to 10046502 225 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 215
Gm47411 13 10048667 to 10051848 3181 - unclassified gene predicted gene, 47411
Gm47405 13 10064758 to 10070866 6108 - sense intronic lncRNA gene predicted gene, 47405
D13Mit172 13 10081042 to 10081188 146 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 172
9330159N22Rik 13 10164744 to 10165774 1030 - unclassified gene RIKEN cDNA 9330159N22 gene
Gm47404 13 10175784 to 10180807 5023 - sense intronic lncRNA gene predicted gene, 47404
Gm26861 13 10359165 to 10673847 314682 + antisense lncRNA gene predicted gene, 26861
Cpgi5271 13 10360077 to 10361200 1123 CpG island CpG island 5271
Tssr121363 13 10360810 to 10360853 43 - TSS region transcription start site region 121363
Chrm3 13 10360847 to 9875486 -485361 - protein coding gene cholinergic receptor, muscarinic 3, cardiac
Tssr121364 13 10360915 to 10360941 26 - TSS region transcription start site region 121364
Tssr121365 13 10360942 to 10360970 28 - TSS region transcription start site region 121365