Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:98718298-98908302

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fcho2 13 98723403 to 98815449 92046 - protein coding gene FCH domain only 2
Tssr123646 13 98725703 to 98725733 30 - TSS region transcription start site region 123646
Gm47550 13 98732986 to 98734690 1704 + unclassified gene predicted gene, 47550
Tssr123647 13 98754331 to 98754361 30 - TSS region transcription start site region 123647
D130062J10Rik 13 98798611 to 98801410 2799 - sense intronic lncRNA gene RIKEN cDNA D130062J10 gene
Gm47551 13 98801172 to 98803736 2564 + antisense lncRNA gene predicted gene, 47551
Tssr123648 13 98803785 to 98803808 23 - TSS region transcription start site region 123648
Tssr123649 13 98813298 to 98813302 4 - TSS region transcription start site region 123649
Cpgi6013 13 98814387 to 98815823 1436 CpG island CpG island 6013
Tssr123650 13 98815120 to 98815201 81 - TSS region transcription start site region 123650
Tssr123651 13 98815221 to 98815257 36 - TSS region transcription start site region 123651
Tssr123652 13 98815263 to 98815275 12 - TSS region transcription start site region 123652
Tssr123653 13 98815365 to 98815402 37 - TSS region transcription start site region 123653
Tssr123654 13 98815408 to 98815431 23 - TSS region transcription start site region 123654
Tssr123655 13 98815584 to 98815606 22 - TSS region transcription start site region 123655
Gm34995 13 98815741 to 98832137 16396 + lncRNA gene predicted gene, 34995
Tssr120816 13 98816722 to 98816738 16 + TSS region transcription start site region 120816
Gm18134 13 98816752 to 98817265 513 + pseudogene predicted gene, 18134
Tnpo1 13 98839019 to 98926384 87365 - protein coding gene transportin 1
Tssr123656 13 98839554 to 98839569 15 - TSS region transcription start site region 123656
Tssr123657 13 98840291 to 98840302 11 - TSS region transcription start site region 123657
Tssr123658 13 98840389 to 98840399 10 - TSS region transcription start site region 123658
Tssr123659 13 98842992 to 98843014 22 - TSS region transcription start site region 123659
Tssr123660 13 98846802 to 98846810 8 - TSS region transcription start site region 123660
8030448K23Rik 13 98871163 to 98874491 3328 unclassified gene RIKEN cDNA 8030448K23 gene
Tssr123661 13 98872203 to 98872225 22 - TSS region transcription start site region 123661
Tssr123662 13 98874854 to 98874858 4 - TSS region transcription start site region 123662
Tssr123663 13 98877878 to 98877882 4 - TSS region transcription start site region 123663
Cpgi6014 13 98890082 to 98891224 1142 CpG island CpG island 6014
Tssr123664 13 98890787 to 98890805 18 - TSS region transcription start site region 123664
Tssr123665 13 98890974 to 98891035 61 - TSS region transcription start site region 123665
Tssr123666 13 98891036 to 98891063 27 - TSS region transcription start site region 123666
Tssr120817 13 98904195 to 98904199 4 + TSS region transcription start site region 120817
Gm5453 13 98904224 to 98904670 446 + pseudogene predicted gene 5453