Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:98576235-98804834

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi6009 13 98588760 to 98589481 721 CpG island CpG island 6009
Gm48050 13 98608411 to 98617662 9251 - unclassified non-coding RNA gene predicted gene, 48050
Cpgi6010 13 98613218 to 98613571 353 CpG island CpG island 6010
Tssr120813 13 98613234 to 98613238 4 + TSS region transcription start site region 120813
Tssr120814 13 98613427 to 98613459 32 + TSS region transcription start site region 120814
Gm4815 13 98613501 to 98614491 990 + pseudogene predicted gene 4815
Tmem174 13 98634978 to 98637410 2432 - protein coding gene transmembrane protein 174
Cpgi6011 13 98636715 to 98637308 593 CpG island CpG island 6011
Tssr123629 13 98637330 to 98637350 20 - TSS region transcription start site region 123629
Tssr123630 13 98637354 to 98637373 19 - TSS region transcription start site region 123630
Tmem171 13 98686235 to 98694834 8599 - protein coding gene transmembrane protein 171
Tssr123631 13 98688452 to 98688480 28 - TSS region transcription start site region 123631
Tssr123632 13 98692151 to 98692185 34 - TSS region transcription start site region 123632
Tssr123633 13 98692195 to 98692217 22 - TSS region transcription start site region 123633
Tssr120815 13 98692304 to 98692322 18 + TSS region transcription start site region 120815
Tssr123634 13 98692715 to 98692725 10 - TSS region transcription start site region 123634
Tssr123635 13 98692725 to 98692734 9 - TSS region transcription start site region 123635
Tssr123636 13 98692759 to 98692787 28 - TSS region transcription start site region 123636
Tssr123637 13 98692789 to 98692807 18 - TSS region transcription start site region 123637
Tssr123638 13 98693119 to 98693145 26 - TSS region transcription start site region 123638
Cpgi6012 13 98694698 to 98695383 685 CpG island CpG island 6012
Tssr123639 13 98694769 to 98694796 27 - TSS region transcription start site region 123639
Tssr123640 13 98694806 to 98694819 13 - TSS region transcription start site region 123640
Tssr123641 13 98694825 to 98694847 22 - TSS region transcription start site region 123641
Tssr123642 13 98694893 to 98694905 12 - TSS region transcription start site region 123642
Tssr123643 13 98695024 to 98695038 14 - TSS region transcription start site region 123643
Tssr123644 13 98695560 to 98695578 18 - TSS region transcription start site region 123644
Tssr123645 13 98695684 to 98695692 8 - TSS region transcription start site region 123645
Gm9465 13 98713074 to 98716510 3436 - lincRNA gene predicted gene 9465
Fcho2 13 98723403 to 98815449 92046 - protein coding gene FCH domain only 2
Tssr123646 13 98725703 to 98725733 30 - TSS region transcription start site region 123646
Gm47550 13 98732986 to 98734690 1704 + unclassified gene predicted gene, 47550
Tssr123647 13 98754331 to 98754361 30 - TSS region transcription start site region 123647
D130062J10Rik 13 98798611 to 98801410 2799 - sense intronic lncRNA gene RIKEN cDNA D130062J10 gene
Gm47551 13 98801172 to 98803736 2564 + antisense lncRNA gene predicted gene, 47551
Tssr123648 13 98803785 to 98803808 23 - TSS region transcription start site region 123648