Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:95679055-96089060

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Iqgap2 13 95627177 to 95891922 264745 - protein coding gene IQ motif containing GTPase activating protein 2
Gm33074 13 95672136 to 95680237 8101 + lncRNA gene predicted gene, 33074
Gm48745 13 95685145 to 95686809 1664 + unclassified gene predicted gene, 48745
Tssr123534 13 95685825 to 95685865 40 - TSS region transcription start site region 123534
Tssr120720 13 95696851 to 95696869 18 + TSS region transcription start site region 120720
Tssr120721 13 95696895 to 95696921 26 + TSS region transcription start site region 120721
F2rl2 13 95696920 to 95702768 5848 + protein coding gene coagulation factor II (thrombin) receptor-like 2
Tssr120722 13 95696932 to 95696979 47 + TSS region transcription start site region 120722
Tssr120723 13 95707467 to 95707489 22 + TSS region transcription start site region 120723
Tssr120724 13 95711165 to 95711166 1 + TSS region transcription start site region 120724
Gm32702 13 95763409 to 95777960 14551 + lncRNA gene predicted gene, 32702
Tssr120725 13 95765121 to 95765138 17 + TSS region transcription start site region 120725
Tssr120726 13 95765325 to 95765364 39 + TSS region transcription start site region 120726
D13Mit320 13 95778268 to 95778558 290 DNA segment DNA Segment, Chr 13, Massachusetts Institute of Technology-320
D13Mit145 13 95824704 to 95824847 143 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 145
Tssr120727 13 95845239 to 95845253 14 + TSS region transcription start site region 120727
Tssr123535 13 95883403 to 95883410 7 - TSS region transcription start site region 123535
Tssr123536 13 95884055 to 95884060 5 - TSS region transcription start site region 123536
Tssr123537 13 95889373 to 95889377 4 - TSS region transcription start site region 123537
Cpgi5978 13 95890855 to 95892602 1747 CpG island CpG island 5978
Tssr123538 13 95891714 to 95891733 19 - TSS region transcription start site region 123538
Tssr123539 13 95891881 to 95891902 21 - TSS region transcription start site region 123539
Tssr123540 13 95891905 to 95891929 24 - TSS region transcription start site region 123540
Tssr123541 13 95892199 to 95892213 14 - TSS region transcription start site region 123541
Tssr123542 13 95892279 to 95892286 7 - TSS region transcription start site region 123542
Tssr123543 13 95892502 to 95892519 17 - TSS region transcription start site region 123543
Tssr120728 13 95893462 to 95893508 46 + TSS region transcription start site region 120728
Gm24032 13 95896962 to 95897120 158 - snRNA gene predicted gene, 24032
Tssr123544 13 95897115 to 95897120 5 - TSS region transcription start site region 123544
Tssr123545 13 95912554 to 95912567 13 - TSS region transcription start site region 123545
Tssr123546 13 95912587 to 95912610 23 - TSS region transcription start site region 123546
Tssr4144 13 95918495 to 95918504 9 - TSS region transcription start site region 4144
Tssr123547 13 95957610 to 95957612 2 - TSS region transcription start site region 123547
Sv2c 13 95959443 to 96132577 173134 - protein coding gene synaptic vesicle glycoprotein 2c
Tssr120729 13 95960656 to 95960670 14 + TSS region transcription start site region 120729
Cpgi5979 13 95961230 to 95961679 449 CpG island CpG island 5979
Tssr123548 13 95961485 to 95961494 9 - TSS region transcription start site region 123548
Tssr123549 13 95961577 to 95961587 10 - TSS region transcription start site region 123549
Tssr123550 13 95961653 to 95961672 19 - TSS region transcription start site region 123550
D13Ertd324e 13 95983174 to 95983396 222 DNA segment DNA segment, Chr 13, ERATO Doi 324, expressed
Tssr120730 13 95988421 to 95988437 16 + TSS region transcription start site region 120730
Cpgi5980 13 95989690 to 95990106 416 CpG island CpG island 5980
Tssr123551 13 96011034 to 96011042 8 - TSS region transcription start site region 123551
Tssr120731 13 96011515 to 96011523 8 + TSS region transcription start site region 120731
Gm20075 13 96079233 to 96081375 2142 - pseudogene predicted gene, 20075
Tssr123552 13 96081278 to 96081302 24 - TSS region transcription start site region 123552
Tssr123553 13 96081363 to 96081376 13 - TSS region transcription start site region 123553
Gm17190 13 96082057 to 96082970 913 + pseudogene predicted gene 17190