Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 13:94974454-95300336

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35 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi5966 13 94975989 to 94976685 696 CpG island CpG island 5966
Wdr41 13 94976344 to 95023314 46970 + protein coding gene WD repeat domain 41
Tssr120705 13 94976364 to 94976422 58 + TSS region transcription start site region 120705
Tssr120706 13 94976435 to 94976452 17 + TSS region transcription start site region 120706
Tssr120707 13 94976455 to 94976475 20 + TSS region transcription start site region 120707
Gm41024 13 94978597 to 94982413 3816 + lncRNA gene predicted gene, 41024
Gm48349 13 95002358 to 95002824 466 + pseudogene predicted gene, 48349
Tssr120708 13 95009982 to 95009990 8 + TSS region transcription start site region 120708
Tssr120709 13 95010010 to 95010028 18 + TSS region transcription start site region 120709
Gm48350 13 95010646 to 95014821 4175 - lncRNA gene predicted gene, 48350
Tssr120710 13 95021826 to 95021863 37 + TSS region transcription start site region 120710
Gm48420 13 95024301 to 95024900 599 + lncRNA gene predicted gene, 48420
Pde8b 13 95024454 to 95250336 225882 - protein coding gene phosphodiesterase 8B
Tssr123495 13 95034247 to 95034288 41 - TSS region transcription start site region 123495
Tssr123496 13 95034289 to 95034316 27 - TSS region transcription start site region 123496
Tssr123497 13 95038324 to 95038332 8 - TSS region transcription start site region 123497
Tssr123498 13 95049404 to 95049416 12 - TSS region transcription start site region 123498
Tssr123499 13 95050566 to 95050569 3 - TSS region transcription start site region 123499
Gm41025 13 95050608 to 95092860 42252 + lncRNA gene predicted gene, 41025
Tssr123500 13 95052998 to 95053002 4 - TSS region transcription start site region 123500
Tssr123501 13 95059098 to 95059116 18 - TSS region transcription start site region 123501
Tssr123502 13 95165643 to 95165646 3 - TSS region transcription start site region 123502
Tssr120711 13 95176686 to 95176692 6 + TSS region transcription start site region 120711
D13Mit160 13 95197866 to 95198129 263 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 160
Gm16243 13 95208112 to 95208936 824 + lncRNA gene predicted gene 16243
Gm20064 13 95218193 to 95219690 1497 - unclassified gene predicted gene, 20064
C030010F05Rik 13 95220327 to 95222349 2022 - lncRNA gene RIKEN cDNA C030010F05 gene
Cpgi5967 13 95222018 to 95223518 1500 CpG island CpG island 5967
Tssr123503 13 95222321 to 95222322 1 - TSS region transcription start site region 123503
Tssr123504 13 95223045 to 95223080 35 - TSS region transcription start site region 123504
Tssr123505 13 95223081 to 95223104 23 - TSS region transcription start site region 123505
Tssr123506 13 95223451 to 95223466 15 - TSS region transcription start site region 123506
Cpgi5968 13 95249724 to 95250437 713 CpG island CpG island 5968
Tssr123507 13 95250268 to 95250331 63 - TSS region transcription start site region 123507
Tssr123508 13 95255122 to 95255138 16 - TSS region transcription start site region 123508