Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:94878597-95082413

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Otp 13 94875627 to 94885125 9498 + protein coding gene orthopedia homeobox
Cpgi5964 13 94882634 to 94884510 1876 CpG island CpG island 5964
Cpgi5965 13 94885152 to 94886064 912 CpG island CpG island 5965
V125Dq10 13 94900000 to 94900000 0 QTL vitamin D active form serum level QTL 10
Tssr120704 13 94957391 to 94957393 2 + TSS region transcription start site region 120704
Cpgi5966 13 94975989 to 94976685 696 CpG island CpG island 5966
Wdr41 13 94976344 to 95023314 46970 + protein coding gene WD repeat domain 41
Tssr120705 13 94976364 to 94976422 58 + TSS region transcription start site region 120705
Tssr120706 13 94976435 to 94976452 17 + TSS region transcription start site region 120706
Tssr120707 13 94976455 to 94976475 20 + TSS region transcription start site region 120707
Gm41024 13 94978597 to 94982413 3816 + lncRNA gene predicted gene, 41024
Gm48349 13 95002358 to 95002824 466 + pseudogene predicted gene, 48349
Tssr120708 13 95009982 to 95009990 8 + TSS region transcription start site region 120708
Tssr120709 13 95010010 to 95010028 18 + TSS region transcription start site region 120709
Gm48350 13 95012681 to 95023790 11109 - antisense lncRNA gene predicted gene, 48350
Tssr120710 13 95021826 to 95021863 37 + TSS region transcription start site region 120710
Gm48420 13 95024301 to 95024900 599 + antisense lncRNA gene predicted gene, 48420
Pde8b 13 95024454 to 95250336 225882 - protein coding gene phosphodiesterase 8B
Tssr123495 13 95034247 to 95034288 41 - TSS region transcription start site region 123495
Tssr123496 13 95034289 to 95034316 27 - TSS region transcription start site region 123496
Tssr123497 13 95038324 to 95038332 8 - TSS region transcription start site region 123497
Tssr123498 13 95049404 to 95049416 12 - TSS region transcription start site region 123498
Tssr123499 13 95050566 to 95050569 3 - TSS region transcription start site region 123499
Tssr123500 13 95052998 to 95053002 4 - TSS region transcription start site region 123500
Gm41025 13 95058837 to 95071701 12864 + lncRNA gene predicted gene, 41025
Tssr123501 13 95059098 to 95059116 18 - TSS region transcription start site region 123501