Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:94740625-95010643

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm48316 13 94752270 to 94752593 323 + pseudogene predicted gene, 48316
Gm46389 13 94754202 to 94754593 391 - pseudogene predicted gene, 46389
Cpgi5958 13 94788727 to 94789598 871 CpG island CpG island 5958
Tssr120697 13 94788873 to 94788951 78 + TSS region transcription start site region 120697
Tbca 13 94788943 to 94842899 53956 + protein coding gene tubulin cofactor A
Tssr123494 13 94789267 to 94789269 2 - TSS region transcription start site region 123494
Tssr120698 13 94817694 to 94817711 17 + TSS region transcription start site region 120698
Tssr120699 13 94826998 to 94827006 8 + TSS region transcription start site region 120699
D13Mit169 13 94866182 to 94866327 145 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 169
Cpgi5959 13 94868419 to 94869714 1295 CpG island CpG island 5959
Cpgi5960 13 94872632 to 94872805 173 CpG island CpG island 5960
Cpgi5961 13 94873118 to 94874024 906 CpG island CpG island 5961
D13Mit258 13 94874002 to 94874115 113 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 258
Cpgi5962 13 94875107 to 94875524 417 CpG island CpG island 5962
Tssr120700 13 94875600 to 94875611 11 + TSS region transcription start site region 120700
Tssr120701 13 94875625 to 94875643 18 + TSS region transcription start site region 120701
Otp 13 94875627 to 94885125 9498 + protein coding gene orthopedia homeobox
Tssr120702 13 94875653 to 94875661 8 + TSS region transcription start site region 120702
Tssr120703 13 94876648 to 94876657 9 + TSS region transcription start site region 120703
Cpgi5963 13 94876869 to 94877689 820 CpG island CpG island 5963
Cpgi5964 13 94882634 to 94884510 1876 CpG island CpG island 5964
Cpgi5965 13 94885152 to 94886064 912 CpG island CpG island 5965
V125Dq10 13 94900000 to 94900000 0 QTL vitamin D active form serum level QTL 10
Tssr120704 13 94957391 to 94957393 2 + TSS region transcription start site region 120704
Cpgi5966 13 94975989 to 94976685 696 CpG island CpG island 5966
Wdr41 13 94976344 to 95023314 46970 + protein coding gene WD repeat domain 41
Tssr120705 13 94976364 to 94976422 58 + TSS region transcription start site region 120705
Tssr120706 13 94976435 to 94976452 17 + TSS region transcription start site region 120706
Tssr120707 13 94976455 to 94976475 20 + TSS region transcription start site region 120707
Gm41024 13 94978597 to 94982413 3816 + lncRNA gene predicted gene, 41024
Gm48349 13 95002358 to 95002824 466 + pseudogene predicted gene, 48349
Tssr120708 13 95009982 to 95009990 8 + TSS region transcription start site region 120708
Tssr120709 13 95010010 to 95010028 18 + TSS region transcription start site region 120709