Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:94200261-94390272

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scamp1 13 94201433 to 94285826 84393 - protein coding gene secretory carrier membrane protein 1
Tssr123475 13 94203583 to 94203611 28 - TSS region transcription start site region 123475
Tssr120676 13 94223604 to 94223615 11 + TSS region transcription start site region 120676
Tssr120677 13 94224878 to 94224893 15 + TSS region transcription start site region 120677
1700042D18Rik 13 94224889 to 94226024 1135 unclassified gene RIKEN cDNA 1700042D18 gene
Tssr120678 13 94224914 to 94224928 14 + TSS region transcription start site region 120678
Tssr123476 13 94245573 to 94245585 12 - TSS region transcription start site region 123476
Tssr123477 13 94246532 to 94246573 41 - TSS region transcription start site region 123477
Tssr123478 13 94246581 to 94246596 15 - TSS region transcription start site region 123478
Tssr123479 13 94253040 to 94253070 30 - TSS region transcription start site region 123479
Tssr123480 13 94258686 to 94258706 20 - TSS region transcription start site region 123480
Tssr123481 13 94279047 to 94279051 4 - TSS region transcription start site region 123481
Cpgi5951 13 94284404 to 94285950 1546 CpG island CpG island 5951
Tssr123482 13 94285281 to 94285342 61 - TSS region transcription start site region 123482
Tssr123483 13 94285352 to 94285441 89 - TSS region transcription start site region 123483
Tssr120679 13 94285477 to 94285492 15 + TSS region transcription start site region 120679
Tssr123484 13 94285893 to 94285901 8 - TSS region transcription start site region 123484
Tssr123485 13 94285993 to 94286020 27 - TSS region transcription start site region 123485
Gm32089 13 94289448 to 94295006 5558 - lincRNA gene predicted gene, 32089
Gm48102 13 94294017 to 94301250 7233 + lincRNA gene predicted gene, 48102
Tssr120680 13 94294042 to 94294052 10 + TSS region transcription start site region 120680
Tssr123486 13 94294967 to 94294985 18 - TSS region transcription start site region 123486
Tssr123487 13 94294993 to 94295010 17 - TSS region transcription start site region 123487
Tssr123488 13 94295019 to 94295036 17 - TSS region transcription start site region 123488
Tssr123489 13 94295048 to 94295059 11 - TSS region transcription start site region 123489
Tssr123490 13 94295061 to 94295072 11 - TSS region transcription start site region 123490
Tssr120681 13 94295261 to 94295272 11 + TSS region transcription start site region 120681
Gm5668 13 94299424 to 94299859 435 - pseudogene predicted gene 5668
Tssr120682 13 94301454 to 94301483 29 + TSS region transcription start site region 120682
Gm38653 13 94303169 to 94306838 3669 - lncRNA gene predicted gene, 38653
Gm41022 13 94306850 to 94310297 3447 + lncRNA gene predicted gene, 41022
Tssr123491 13 94328104 to 94328108 4 - TSS region transcription start site region 123491
Gm9776 13 94356747 to 94358923 2176 - bidirectional promoter lncRNA gene predicted gene 9776
Tssr123492 13 94357505 to 94357521 16 - TSS region transcription start site region 123492
Cpgi5952 13 94358212 to 94359516 1304 CpG island CpG island 5952
Tssr123493 13 94358892 to 94358931 39 - TSS region transcription start site region 123493
Tssr120683 13 94358943 to 94359055 112 + TSS region transcription start site region 120683
Ap3b1 13 94358960 to 94566317 207357 + protein coding gene adaptor-related protein complex 3, beta 1 subunit
Tssr120684 13 94359056 to 94359097 41 + TSS region transcription start site region 120684
Tssr120685 13 94359104 to 94359115 11 + TSS region transcription start site region 120685
Tssr120686 13 94359453 to 94359467 14 + TSS region transcription start site region 120686
Tssr120687 13 94359480 to 94359500 20 + TSS region transcription start site region 120687
Tssr120688 13 94388881 to 94388898 17 + TSS region transcription start site region 120688