Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:93651679-94063016

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bhmt2 13 93656097 to 93674302 18205 - protein coding gene betaine-homocysteine methyltransferase 2
Cpgi5945 13 93674112 to 93674729 617 CpG island CpG island 5945
Tssr123470 13 93674276 to 93674297 21 - TSS region transcription start site region 123470
Tssr123471 13 93674300 to 93674309 9 - TSS region transcription start site region 123471
Tssr123472 13 93674323 to 93674326 3 - TSS region transcription start site region 123472
Tssr120657 13 93674403 to 93674452 49 + TSS region transcription start site region 120657
Dmgdh 13 93674436 to 93752823 78387 + protein coding gene dimethylglycine dehydrogenase precursor
AW495222 13 93706182 to 93719175 12993 - antisense lncRNA gene expressed sequence AW495222
Tssr4141 13 93711716 to 93711722 6 + TSS region transcription start site region 4141
Gm15620 13 93727363 to 93727702 339 - pseudogene predicted gene 15620
Cpgi5946 13 93728155 to 93728394 239 CpG island CpG island 5946
Gm41021 13 93754998 to 93758525 3527 + lncRNA gene predicted gene, 41021
Gm47210 13 93770950 to 93772194 1244 - bidirectional promoter lncRNA gene predicted gene, 47210
Cpgi5947 13 93771269 to 93772403 1134 CpG island CpG island 5947
Tssr120658 13 93771656 to 93771702 46 + TSS region transcription start site region 120658
Arsb 13 93771679 to 93943016 171337 + protein coding gene arylsulfatase B
Tssr120659 13 93771716 to 93771731 15 + TSS region transcription start site region 120659
Mir5624 13 93790777 to 93790837 60 + miRNA gene microRNA 5624
Tssr120660 13 93808462 to 93808471 9 + TSS region transcription start site region 120660
Tssr120661 13 93841479 to 93841484 5 + TSS region transcription start site region 120661
Cpgi5948 13 93855982 to 93856153 171 CpG island CpG island 5948
Gm25534 13 93923187 to 93923311 124 - miRNA gene predicted gene, 25534
Gm26527 13 93940990 to 93943015 2025 - lincRNA gene predicted gene, 26527
Gm24737 13 93956310 to 93956409 99 + snRNA gene predicted gene, 24737
Gm47216 13 93983195 to 93991768 8573 - lincRNA gene predicted gene, 47216
Cycs-ps3 13 94053843 to 94054388 545 + pseudogene cytochrome c, pseudogene 3
D13Mit28 13 94054637 to 94054799 162 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 28
Cpgi5949 13 94057220 to 94058307 1087 CpG island CpG island 5949
Tssr120662 13 94057663 to 94057686 23 + TSS region transcription start site region 120662
Tssr120663 13 94057757 to 94057838 81 + TSS region transcription start site region 120663
Lhfpl2 13 94057796 to 94195409 137613 + protein coding gene lipoma HMGIC fusion partner-like 2