Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:93298488-93598835

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr120647 13 93299629 to 93299646 17 + TSS region transcription start site region 120647
Tssr120648 13 93301217 to 93301248 31 + TSS region transcription start site region 120648
A230091C14Rik 13 93301513 to 93303367 1854 unclassified gene RIKEN cDNA A230091C14 gene
Homer1 13 93303247 to 93405129 101882 + protein coding gene homer scaffolding protein 1
Cpgi5943 13 93303313 to 93304996 1683 CpG island CpG island 5943
Tssr120649 13 93303774 to 93303788 14 + TSS region transcription start site region 120649
Tssr120650 13 93304066 to 93304138 72 + TSS region transcription start site region 120650
Tssr120651 13 93304922 to 93304935 13 + TSS region transcription start site region 120651
Tssr120652 13 93304940 to 93304955 15 + TSS region transcription start site region 120652
Tssr120653 13 93308006 to 93308029 23 + TSS region transcription start site region 120653
Gm47075 13 93312041 to 93314055 2014 + unclassified gene predicted gene, 47075
Gm47088 13 93317427 to 93319065 1638 + unclassified gene predicted gene, 47088
Tssr120654 13 93340241 to 93340250 9 + TSS region transcription start site region 120654
Tssr120655 13 93340282 to 93340293 11 + TSS region transcription start site region 120655
Gm47155 13 93410783 to 93412957 2174 + unclassified gene predicted gene, 47155
Gm18960 13 93420604 to 93421316 712 - pseudogene predicted gene, 18960
Jmy 13 93430101 to 93499808 69707 - protein coding gene junction-mediating and regulatory protein
Tssr123455 13 93431047 to 93431052 5 - TSS region transcription start site region 123455
Gm6109 13 93448488 to 93448835 347 + protein coding gene predicted gene 6109
Tssr120656 13 93461737 to 93461778 41 + TSS region transcription start site region 120656
Gm30155 13 93461846 to 93462184 338 + pseudogene predicted gene, 30155
Cpgi5944 13 93498190 to 93500199 2009 CpG island CpG island 5944
Tssr123456 13 93499444 to 93499466 22 - TSS region transcription start site region 123456
Tssr123457 13 93499667 to 93499674 7 - TSS region transcription start site region 123457
Tssr123458 13 93499683 to 93499702 19 - TSS region transcription start site region 123458
Tssr123459 13 93499716 to 93499801 85 - TSS region transcription start site region 123459
Tssr123460 13 93499803 to 93499825 22 - TSS region transcription start site region 123460
Tssr4140 13 93563305 to 93563313 8 + TSS region transcription start site region 4140
D13Mit29 13 93572026 to 93572175 149 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 29
Gm18133 13 93585154 to 93585697 543 + pseudogene predicted gene, 18133
Gm31977 13 93595723 to 93598384 2661 - lncRNA gene predicted gene, 31977
Tssr123461 13 93598395 to 93598403 8 - TSS region transcription start site region 123461