Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:93167427-93469065

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tent2 13 93146282 to 93192309 46027 - protein coding gene terminal nucleotidyltransferase 2
Tssr123448 13 93188845 to 93188850 5 - TSS region transcription start site region 123448
Cpgi5942 13 93191834 to 93192732 898 CpG island CpG island 5942
Tssr123449 13 93192193 to 93192200 7 - TSS region transcription start site region 123449
Tssr123450 13 93192217 to 93192237 20 - TSS region transcription start site region 123450
Tssr123451 13 93192239 to 93192263 24 - TSS region transcription start site region 123451
Tssr123452 13 93192270 to 93192328 58 - TSS region transcription start site region 123452
Tssr123453 13 93192375 to 93192424 49 - TSS region transcription start site region 123453
Tssr123454 13 93192425 to 93192432 7 - TSS region transcription start site region 123454
Gm41020 13 93197339 to 93198690 1351 - lncRNA gene predicted gene, 41020
Gm2076 13 93293781 to 93294751 970 + pseudogene predicted gene 2076
Tssr120647 13 93299629 to 93299646 17 + TSS region transcription start site region 120647
Tssr120648 13 93301217 to 93301248 31 + TSS region transcription start site region 120648
A230091C14Rik 13 93301513 to 93303367 1854 unclassified gene RIKEN cDNA A230091C14 gene
Homer1 13 93303247 to 93405129 101882 + protein coding gene homer scaffolding protein 1
Cpgi5943 13 93303313 to 93304996 1683 CpG island CpG island 5943
Tssr120649 13 93303774 to 93303788 14 + TSS region transcription start site region 120649
Tssr120650 13 93304066 to 93304138 72 + TSS region transcription start site region 120650
Tssr120651 13 93304922 to 93304935 13 + TSS region transcription start site region 120651
Tssr120652 13 93304940 to 93304955 15 + TSS region transcription start site region 120652
Tssr120653 13 93308006 to 93308029 23 + TSS region transcription start site region 120653
Gm47075 13 93312041 to 93314055 2014 + unclassified gene predicted gene, 47075
Gm47088 13 93317427 to 93319065 1638 + unclassified gene predicted gene, 47088
Tssr120654 13 93340241 to 93340250 9 + TSS region transcription start site region 120654
Tssr120655 13 93340282 to 93340293 11 + TSS region transcription start site region 120655
Gm47155 13 93410783 to 93412957 2174 + unclassified gene predicted gene, 47155
Gm18960 13 93420604 to 93421316 712 - pseudogene predicted gene, 18960
Jmy 13 93430101 to 93499808 69707 - protein coding gene junction-mediating and regulatory protein
Tssr123455 13 93431047 to 93431052 5 - TSS region transcription start site region 123455
Gm6109 13 93448488 to 93448835 347 + protein coding gene predicted gene 6109
Tssr120656 13 93461737 to 93461778 41 + TSS region transcription start site region 120656
Gm30155 13 93461846 to 93462184 338 + pseudogene predicted gene, 30155