Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:92300920-92550929

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Msh3 13 92211878 to 92355003 143125 - protein coding gene mutS homolog 3
Gm20379 13 92305980 to 92307183 1203 + protein coding gene predicted gene, 20379
Cpgi5933 13 92354373 to 92355667 1294 CpG island CpG island 5933
Tssr123429 13 92354503 to 92354520 17 - TSS region transcription start site region 123429
Tssr120622 13 92354748 to 92354766 18 + TSS region transcription start site region 120622
Dhfr 13 92354783 to 92389053 34270 + protein coding gene dihydrofolate reductase
Tssr123430 13 92354943 to 92355025 82 - TSS region transcription start site region 123430
Tssr120623 13 92355139 to 92355176 37 + TSS region transcription start site region 120623
Tssr120624 13 92355186 to 92355210 24 + TSS region transcription start site region 120624
Tssr120625 13 92355212 to 92355217 5 + TSS region transcription start site region 120625
Tssr120626 13 92355239 to 92355248 9 + TSS region transcription start site region 120626
Gm19308 13 92355706 to 92357918 2212 - pseudogene predicted gene, 19308
C030017D09Rik 13 92415017 to 92427224 12207 - antisense lncRNA gene RIKEN cDNA C030017D09 gene
Cpgi5934 13 92425648 to 92427256 1608 CpG island CpG island 5934
Ankrd34b 13 92425896 to 92441658 15762 + protein coding gene ankyrin repeat domain 34B
Tssr120627 13 92425920 to 92425929 9 + TSS region transcription start site region 120627
Tssr120628 13 92425957 to 92426031 74 + TSS region transcription start site region 120628
D13Mit286 13 92445760 to 92445877 117 DNA segment DNA Segment, Chr 13, Massachusetts Institute of Technology 286
Fam151b 13 92449625 to 92484015 34390 - protein coding gene family with sequence similarity 151, member B
Tssr123431 13 92451256 to 92451276 20 - TSS region transcription start site region 123431
Cpgi5935 13 92483910 to 92484071 161 CpG island CpG island 5935
Tssr123432 13 92483951 to 92483986 35 - TSS region transcription start site region 123432
Tssr123433 13 92483996 to 92484037 41 - TSS region transcription start site region 123433
Zfyve16 13 92487108 to 92530868 43760 - protein coding gene zinc finger, FYVE domain containing 16
Tssr123434 13 92523264 to 92523276 12 - TSS region transcription start site region 123434
Tssr123435 13 92529983 to 92529987 4 - TSS region transcription start site region 123435
Cpgi5936 13 92530164 to 92531391 1227 CpG island CpG island 5936
Tssr123436 13 92530788 to 92530802 14 - TSS region transcription start site region 123436
Tssr123437 13 92530813 to 92530858 45 - TSS region transcription start site region 123437
Tssr120629 13 92530907 to 92530923 16 + TSS region transcription start site region 120629
Tssr120630 13 92530933 to 92530961 28 + TSS region transcription start site region 120630