Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:92174943-92535025

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D13Mit159 13 92183421 to 92183558 137 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 159
Msh3 13 92211878 to 92355003 143125 - protein coding gene mutS homolog 3
Gm20379 13 92305980 to 92307183 1203 + protein coding gene predicted gene, 20379
Cpgi5933 13 92354373 to 92355667 1294 CpG island CpG island 5933
Tssr123429 13 92354503 to 92354520 17 - TSS region transcription start site region 123429
Tssr120622 13 92354748 to 92354766 18 + TSS region transcription start site region 120622
Dhfr 13 92354783 to 92389053 34270 + protein coding gene dihydrofolate reductase
Tssr123430 13 92354943 to 92355025 82 - TSS region transcription start site region 123430
Tssr120623 13 92355139 to 92355176 37 + TSS region transcription start site region 120623
Tssr120624 13 92355186 to 92355210 24 + TSS region transcription start site region 120624
Tssr120625 13 92355212 to 92355217 5 + TSS region transcription start site region 120625
Tssr120626 13 92355239 to 92355248 9 + TSS region transcription start site region 120626
Gm19308 13 92355706 to 92357918 2212 - pseudogene predicted gene, 19308
C030017D09Rik 13 92415017 to 92427224 12207 - antisense lncRNA gene RIKEN cDNA C030017D09 gene
Cpgi5934 13 92425648 to 92427256 1608 CpG island CpG island 5934
Ankrd34b 13 92425896 to 92441658 15762 + protein coding gene ankyrin repeat domain 34B
Tssr120627 13 92425920 to 92425929 9 + TSS region transcription start site region 120627
Tssr120628 13 92425957 to 92426031 74 + TSS region transcription start site region 120628
D13Mit286 13 92445760 to 92445877 117 DNA segment DNA Segment, Chr 13, Massachusetts Institute of Technology 286
Fam151b 13 92449625 to 92484015 34390 - protein coding gene family with sequence similarity 151, member B
Tssr123431 13 92451256 to 92451276 20 - TSS region transcription start site region 123431
Cpgi5935 13 92483910 to 92484071 161 CpG island CpG island 5935
Tssr123432 13 92483951 to 92483986 35 - TSS region transcription start site region 123432
Tssr123433 13 92483996 to 92484037 41 - TSS region transcription start site region 123433
Zfyve16 13 92487108 to 92530868 43760 - protein coding gene zinc finger, FYVE domain containing 16
Tssr123434 13 92523264 to 92523276 12 - TSS region transcription start site region 123434
Tssr123435 13 92529983 to 92529987 4 - TSS region transcription start site region 123435
Cpgi5936 13 92530164 to 92531391 1227 CpG island CpG island 5936
Tssr123436 13 92530788 to 92530802 14 - TSS region transcription start site region 123436
Tssr123437 13 92530813 to 92530858 45 - TSS region transcription start site region 123437
Tssr120629 13 92530907 to 92530923 16 + TSS region transcription start site region 120629
Tssr120630 13 92530933 to 92530961 28 + TSS region transcription start site region 120630