Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:91751567-92041578

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Acot12 13 91741512 to 91786148 44636 + protein coding gene acyl-CoA thioesterase 12
Gm27656 13 91752106 to 91752185 79 + miRNA gene predicted gene, 27656
4933440K10Rik 13 91780896 to 91782354 1458 unclassified gene RIKEN cDNA 4933440K10 gene
D13Mit193.1 13 91780967 to 91781078 111 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 193.1
D13Mit193 13 91781056 to 91781177 121 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 193
Zcchc9 13 91796533 to 91807705 11172 - protein coding gene zinc finger, CCHC domain containing 9
Cpgi5931 13 91807145 to 91807874 729 CpG island CpG island 5931
Tssr123411 13 91807612 to 91807619 7 - TSS region transcription start site region 123411
Tssr123412 13 91807636 to 91807655 19 - TSS region transcription start site region 123412
Tssr123413 13 91807658 to 91807708 50 - TSS region transcription start site region 123413
Tssr120617 13 91807701 to 91807720 19 + TSS region transcription start site region 120617
Tssr120618 13 91807780 to 91807793 13 + TSS region transcription start site region 120618
Ckmt2 13 91853387 to 91876885 23498 - protein coding gene creatine kinase, mitochondrial 2
Tssr123414 13 91861310 to 91861313 3 - TSS region transcription start site region 123414
Tssr123415 13 91861322 to 91861334 12 - TSS region transcription start site region 123415
Tssr123416 13 91861340 to 91861351 11 - TSS region transcription start site region 123416
Tssr123417 13 91861354 to 91861371 17 - TSS region transcription start site region 123417
Tssr123418 13 91861375 to 91861380 5 - TSS region transcription start site region 123418
Tssr120619 13 91861430 to 91861443 13 + TSS region transcription start site region 120619
1700119I11Rik 13 91861432 to 91862044 612 + antisense lncRNA gene RIKEN cDNA 1700119I11 gene
Tssr123419 13 91876876 to 91876890 14 - TSS region transcription start site region 123419
Rasgrf2 13 91880407 to 92131494 251087 - protein coding gene RAS protein-specific guanine nucleotide-releasing factor 2
Tssr123420 13 91896567 to 91896578 11 - TSS region transcription start site region 123420
Gm46435 13 91923619 to 91934105 10486 + lncRNA gene predicted gene, 46435
Tssr120620 13 91930629 to 91930637 8 + TSS region transcription start site region 120620
Tssr120621 13 91930664 to 91930671 7 + TSS region transcription start site region 120621
Tssr4137 13 92021718 to 92021722 4 - TSS region transcription start site region 4137
Tssr123421 13 92030897 to 92030908 11 - TSS region transcription start site region 123421
Tssr123422 13 92030919 to 92030954 35 - TSS region transcription start site region 123422