Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:91596665-91846872

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ssbp2 13 91460283 to 91703429 243146 + protein coding gene single-stranded DNA binding protein 2
Tssr120609 13 91606444 to 91606450 6 + TSS region transcription start site region 120609
Tssr120610 13 91609277 to 91609303 26 + TSS region transcription start site region 120610
Tssr120611 13 91624297 to 91624304 7 + TSS region transcription start site region 120611
D13Mit192.1 13 91665778 to 91665926 148 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 192.1
Tssr120612 13 91676782 to 91676793 11 + TSS region transcription start site region 120612
Tssr120613 13 91678616 to 91678631 15 + TSS region transcription start site region 120613
4833422C13Rik 13 91701665 to 91741872 40207 - antisense lncRNA gene RIKEN cDNA 4833422C13 gene
Gm22778 13 91723256 to 91723383 127 + snoRNA gene predicted gene, 22778
Cpgi5930 13 91741175 to 91741884 709 CpG island CpG island 5930
Tssr120614 13 91741484 to 91741489 5 + TSS region transcription start site region 120614
Tssr120615 13 91741507 to 91741531 24 + TSS region transcription start site region 120615
Acot12 13 91741512 to 91786148 44636 + protein coding gene acyl-CoA thioesterase 12
Tssr123409 13 91741746 to 91741766 20 - TSS region transcription start site region 123409
Tssr123410 13 91741866 to 91741880 14 - TSS region transcription start site region 123410
Gm24597 13 91744705 to 91745004 299 - unclassified non-coding RNA gene predicted gene, 24597
Tssr120616 13 91750202 to 91750235 33 + TSS region transcription start site region 120616
Gm27656 13 91752106 to 91752185 79 + miRNA gene predicted gene, 27656
4933440K10Rik 13 91780896 to 91782354 1458 unclassified gene RIKEN cDNA 4933440K10 gene
D13Mit193.1 13 91780967 to 91781078 111 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 193.1
D13Mit193 13 91781056 to 91781177 121 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 193
Zcchc9 13 91796533 to 91807705 11172 - protein coding gene zinc finger, CCHC domain containing 9
Cpgi5931 13 91807145 to 91807874 729 CpG island CpG island 5931
Tssr123411 13 91807612 to 91807619 7 - TSS region transcription start site region 123411
Tssr123412 13 91807636 to 91807655 19 - TSS region transcription start site region 123412
Tssr123413 13 91807658 to 91807708 50 - TSS region transcription start site region 123413
Tssr120617 13 91807701 to 91807720 19 + TSS region transcription start site region 120617
Tssr120618 13 91807780 to 91807793 13 + TSS region transcription start site region 120618