Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:9076601-9486603

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi5263 13 9093364 to 9094842 1478 CpG island CpG island 5263
Tssr118307 13 9093814 to 9093828 14 + TSS region transcription start site region 118307
Larp4b 13 9093881 to 9174451 80570 + protein coding gene La ribonucleoprotein domain family, member 4B
Tssr118308 13 9093885 to 9093892 7 + TSS region transcription start site region 118308
Tssr118309 13 9093893 to 9093927 34 + TSS region transcription start site region 118309
Tssr118310 13 9093959 to 9093970 11 + TSS region transcription start site region 118310
Gm23553 13 9109305 to 9109599 294 + unclassified non-coding RNA gene predicted gene, 23553
Tssr118311 13 9127942 to 9127959 17 + TSS region transcription start site region 118311
Tssr118312 13 9127964 to 9127986 22 + TSS region transcription start site region 118312
A130023E24Rik 13 9128238 to 9130508 2270 unclassified non-coding RNA gene RIKEN cDNA A130023E24 gene
Gm28155 13 9140731 to 9140881 150 - pseudogene predicted gene 28155
Tssr118313 13 9145378 to 9145391 13 + TSS region transcription start site region 118313
Tssr118314 13 9149238 to 9149245 7 + TSS region transcription start site region 118314
Tssr3989 13 9152358 to 9152378 20 - TSS region transcription start site region 3989
Tssr118315 13 9171327 to 9171332 5 + TSS region transcription start site region 118315
Tssr121352 13 9173084 to 9173089 5 - TSS region transcription start site region 121352
Tssr121353 13 9173477 to 9173485 8 - TSS region transcription start site region 121353
Tssr118316 13 9175416 to 9175450 34 + TSS region transcription start site region 118316
Cpgi5264 13 9223440 to 9223757 317 CpG island CpG island 5264
Gm8784 13 9223537 to 9224971 1434 + pseudogene predicted gene 8784
Tssr118317 13 9242719 to 9242726 7 + TSS region transcription start site region 118317
Gm48825 13 9268684 to 9274143 5459 + lincRNA gene predicted gene, 48825
Gm46391 13 9272919 to 9273121 202 - pseudogene predicted gene, 46391
Cpgi5265 13 9276020 to 9277857 1837 CpG island CpG island 5265
Tssr118318 13 9276477 to 9276620 143 + TSS region transcription start site region 118318
Dip2c 13 9276528 to 9668928 392400 + protein coding gene disco interacting protein 2 homolog C
Tssr118319 13 9276639 to 9276661 22 + TSS region transcription start site region 118319
Tssr118320 13 9276669 to 9276714 45 + TSS region transcription start site region 118320
Tssr118321 13 9276716 to 9276727 11 + TSS region transcription start site region 118321
Tssr118322 13 9278174 to 9278178 4 + TSS region transcription start site region 118322
Tssr118323 13 9280649 to 9280653 4 + TSS region transcription start site region 118323
Tssr118324 13 9281601 to 9281603 2 + TSS region transcription start site region 118324
Gm48887 13 9321427 to 9322979 1552 + unclassified gene predicted gene, 48887
Gm48890 13 9328630 to 9330247 1617 + unclassified gene predicted gene, 48890
Gm48870 13 9344402 to 9348425 4023 + unclassified gene predicted gene, 48870
Tssr118325 13 9350076 to 9350080 4 + TSS region transcription start site region 118325
Gm48869 13 9352028 to 9352689 661 + pseudogene predicted gene, 48869
Gm19191 13 9385729 to 9387327 1598 - pseudogene predicted gene, 19191
Gm26601 13 9387139 to 9391741 4602 + lincRNA gene predicted gene, 26601
Cpgi5266 13 9387699 to 9387988 289 CpG island CpG island 5266
Gm48889 13 9412517 to 9415160 2643 + unclassified gene predicted gene, 48889
D13Mit239 13 9417007 to 9417106 99 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 239
Tssr118326 13 9418894 to 9418906 12 + TSS region transcription start site region 118326
Gm48871 13 9445900 to 9448419 2519 + unclassified gene predicted gene, 48871
D13Mit55 13 9467486 to 9467678 192 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 55