MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:89963172-90513714

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Xrcc4	13	89848914 to 90089608	240694	-	protein coding gene	X-ray repair complementing defective repair in Chinese hamster cells 4
Tssr123395	13	90089060 to 90089092	32	-	TSS region	transcription start site region 123395
Tssr123396	13	90089105 to 90089116	11	-	TSS region	transcription start site region 123396
Cpgi5925	13	90089263 to 90090137	874		CpG island	CpG island 5925
Tssr123397	13	90089513 to 90089543	30	-	TSS region	transcription start site region 123397
Tssr123398	13	90089556 to 90089616	60	-	TSS region	transcription start site region 123398
Tmem167	13	90089667 to 90114921	25254	+	protein coding gene	transmembrane protein 167
Tssr120592	13	90089677 to 90089688	11	+	TSS region	transcription start site region 120592
Tssr120593	13	90089705 to 90089740	35	+	TSS region	transcription start site region 120593
Gm24507	13	90098981 to 90099114	133	+	snoRNA gene	predicted gene, 24507
Tssr120594	13	90101822 to 90101827	5	+	TSS region	transcription start site region 120594
Gm37727	13	90157154 to 90157972	818	+	unclassified gene	predicted gene, 37727
Gm41013	13	90160746 to 90163019	2273	-	lncRNA gene	predicted gene, 41013
Gm29680	13	90179217 to 90217142	37925	-	lincRNA gene	predicted gene, 29680
Gm37054	13	90238172 to 90238714	542	+	unclassified gene	predicted gene, 37054
Gm47520	13	90360130 to 90418100	57970	-	lincRNA gene	predicted gene, 47520
Gm37708	13	90385663 to 90386557	894	-	unclassified gene	predicted gene, 37708
Gm35111	13	90466750 to 90549165	82415	-	lncRNA gene	predicted gene, 35111