Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:89074819-89694825

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Edil3 13 88821472 to 89323223 501751 + protein coding gene EGF-like repeats and discoidin I-like domains 3
Tssr120580 13 89209709 to 89209714 5 + TSS region transcription start site region 120580
Tssr120581 13 89227467 to 89227473 6 + TSS region transcription start site region 120581
Tssr123375 13 89278356 to 89278357 1 - TSS region transcription start site region 123375
Tssr123376 13 89384819 to 89384825 6 - TSS region transcription start site region 123376
Gm34699 13 89499220 to 89539669 40449 - lncRNA gene predicted gene, 34699
Cpgi5921 13 89539118 to 89539621 503 CpG island CpG island 5921
Tssr120582 13 89540505 to 89540510 5 + TSS region transcription start site region 120582
Hapln1 13 89540528 to 89611832 71304 + protein coding gene hyaluronan and proteoglycan link protein 1
Tssr120583 13 89540662 to 89540678 16 + TSS region transcription start site region 120583
Tssr120584 13 89540687 to 89540698 11 + TSS region transcription start site region 120584
Tssr120585 13 89540705 to 89540712 7 + TSS region transcription start site region 120585
Tssr120586 13 89540815 to 89540821 6 + TSS region transcription start site region 120586
Tssr120587 13 89540845 to 89540865 20 + TSS region transcription start site region 120587
Gm8546 13 89577158 to 89578413 1255 - pseudogene predicted gene 8546
Tssr123377 13 89578441 to 89578463 22 - TSS region transcription start site region 123377
Tssr120588 13 89584524 to 89584543 19 + TSS region transcription start site region 120588
Tssr120589 13 89584651 to 89584708 57 + TSS region transcription start site region 120589
Vcan 13 89655312 to 89742509 87197 - protein coding gene versican
Tssr123378 13 89658104 to 89658126 22 - TSS region transcription start site region 123378
Tssr123379 13 89662026 to 89662034 8 - TSS region transcription start site region 123379
Tssr123380 13 89662056 to 89662067 11 - TSS region transcription start site region 123380
Gm16318 13 89662770 to 89663370 600 + pseudogene predicted gene 16318
Tssr123381 13 89690731 to 89690735 4 - TSS region transcription start site region 123381
Acigg6 13 105683731 to 89583537 -16100194 QTL anti COL7 IgG2a/c antibody 6