Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:8886004-9106052

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi5260 13 8885532 to 8886243 711 CpG island CpG island 5260
Idi1 13 8885606 to 8892396 6790 + protein coding gene isopentenyl-diphosphate delta isomerase
Gm22750 13 8921336 to 8921438 102 - miRNA gene predicted gene, 22750
Cpgi5261 13 8931969 to 8932352 383 CpG island CpG island 5261
Rpl10a-ps2 13 8940336 to 8940977 641 - pseudogene ribosomal protein L10A, pseudogene 2
Gm9745 13 8941575 to 8948231 6656 - protein coding gene predicted gene 9745
Gm25274 13 8945045 to 8945179 134 + snoRNA gene predicted gene, 25274
Gm22115 13 8949921 to 8950053 132 - snoRNA gene predicted gene, 22115
Tssr3987 13 8952860 to 8952867 7 + TSS region transcription start site region 3987
Idi2 13 8952863 to 8960935 8072 + protein coding gene isopentenyl-diphosphate delta isomerase 2
Gm23923 13 8955932 to 8956064 132 - snoRNA gene predicted gene, 23923
Tssr118305 13 8965776 to 8965780 4 + TSS region transcription start site region 118305
Gm48649 13 8966705 to 8968082 1377 + pseudogene predicted gene, 48649
Gtpbp4 13 8972070 to 8996532 24462 - protein coding gene GTP binding protein 4
Tssr121346 13 8974526 to 8974531 5 - TSS region transcription start site region 121346
Tssr121347 13 8977377 to 8977390 13 - TSS region transcription start site region 121347
Tssr121348 13 8979965 to 8979984 19 - TSS region transcription start site region 121348
Gm48650 13 8993005 to 8993238 233 + pseudogene predicted gene, 48650
Cpgi5262 13 8995590 to 8996635 1045 CpG island CpG island 5262
Tssr118306 13 8995591 to 8995611 20 + TSS region transcription start site region 118306
Tssr121349 13 8996004 to 8996052 48 - TSS region transcription start site region 121349
Tssr121350 13 8996057 to 8996068 11 - TSS region transcription start site region 121350
Tssr3988 13 8996156 to 8996209 53 + TSS region transcription start site region 3988
Gm36264 13 9001952 to 9076335 74383 - lincRNA gene predicted gene, 36264
Gm8782 13 9025732 to 9026545 813 - pseudogene predicted gene 8782
Tssr121351 13 9076381 to 9076392 11 - TSS region transcription start site region 121351
Cpgi5263 13 9093364 to 9094842 1478 CpG island CpG island 5263
Tssr118307 13 9093814 to 9093828 14 + TSS region transcription start site region 118307
Larp4b 13 9093881 to 9174451 80570 + protein coding gene La ribonucleoprotein domain family, member 4B
Tssr118308 13 9093885 to 9093892 7 + TSS region transcription start site region 118308
Tssr118309 13 9093893 to 9093927 34 + TSS region transcription start site region 118309
Tssr118310 13 9093959 to 9093970 11 + TSS region transcription start site region 118310