Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:88171774-89471795

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D13Mit315 13 88184190 to 88184312 122 DNA segment DNA Segment, Chr 13 Massachusetts Institute of Technology 315
Gm27044 13 88184661 to 88185456 795 - pseudogene predicted gene, 27044
Gm47651 13 88382346 to 88382622 276 + pseudogene predicted gene, 47651
Tssr120559 13 88390576 to 88390580 4 + TSS region transcription start site region 120559
Gm8526 13 88478580 to 88479054 474 + pseudogene predicted gene 8526
Gm47653 13 88480632 to 88480791 159 + pseudogene predicted gene, 47653
Gm19139 13 88509280 to 88511336 2056 - pseudogene predicted gene, 19139
Gm34585 13 88521190 to 88578168 56978 + lincRNA gene predicted gene, 34585
Tssr120560 13 88521190 to 88521203 13 + TSS region transcription start site region 120560
Tssr120561 13 88521218 to 88521230 12 + TSS region transcription start site region 120561
Gm5667 13 88547216 to 88548262 1046 + pseudogene predicted gene 5667
Cpgi5919 13 88821209 to 88822282 1073 CpG island CpG island 5919
Edil3 13 88821472 to 89323223 501751 + protein coding gene EGF-like repeats and discoidin I-like domains 3
Tssr120562 13 88821474 to 88821520 46 + TSS region transcription start site region 120562
Tssr120563 13 88821543 to 88821580 37 + TSS region transcription start site region 120563
Tssr120564 13 88821582 to 88821591 9 + TSS region transcription start site region 120564
Tssr120565 13 88821594 to 88821603 9 + TSS region transcription start site region 120565
Tssr120566 13 88821606 to 88821623 17 + TSS region transcription start site region 120566
Tssr120567 13 88821669 to 88821676 7 + TSS region transcription start site region 120567
Tssr120568 13 88821679 to 88821684 5 + TSS region transcription start site region 120568
Tssr120569 13 88821708 to 88821719 11 + TSS region transcription start site region 120569
Tssr120570 13 88821732 to 88821739 7 + TSS region transcription start site region 120570
Tssr120571 13 88821750 to 88821761 11 + TSS region transcription start site region 120571
Tssr123374 13 88821774 to 88821795 21 - TSS region transcription start site region 123374
Tssr120572 13 88821882 to 88821914 32 + TSS region transcription start site region 120572
Tssr120573 13 88821916 to 88821942 26 + TSS region transcription start site region 120573
Tssr120574 13 88821943 to 88821976 33 + TSS region transcription start site region 120574
Tssr120575 13 88823591 to 88823595 4 + TSS region transcription start site region 120575
Cpgi5920 13 88823638 to 88824152 514 CpG island CpG island 5920
Tssr120576 13 88824214 to 88824218 4 + TSS region transcription start site region 120576
Gm38504 13 88824224 to 88836120 11896 + lncRNA gene predicted gene, 38504
Tssr120577 13 88827494 to 88827495 1 + TSS region transcription start site region 120577
Gm18317 13 88843574 to 88844576 1002 + pseudogene predicted gene, 18317
Gm46433 13 88870746 to 88880679 9933 + lncRNA gene predicted gene, 46433
Tssr120578 13 88920383 to 88920386 3 + TSS region transcription start site region 120578
Tssr120579 13 89051407 to 89051411 4 + TSS region transcription start site region 120579
Tssr120580 13 89209709 to 89209714 5 + TSS region transcription start site region 120580
Tssr120581 13 89227467 to 89227473 6 + TSS region transcription start site region 120581
Tssr123375 13 89278356 to 89278357 1 - TSS region transcription start site region 123375
Tssr123376 13 89384819 to 89384825 6 - TSS region transcription start site region 123376