Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:83840297-84249772

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D13Mit69 13 83842575 to 83842773 198 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 69
2810049E08Rik 13 83891208 to 83928710 37502 + lincRNA gene RIKEN cDNA 2810049E08 gene
Gm4241 13 83971355 to 83987991 16636 - lincRNA gene predicted gene 4241
Tssr123342 13 83987841 to 83987863 22 - TSS region transcription start site region 123342
Gm8447 13 83997547 to 83998439 892 - pseudogene predicted gene 8447
Gm17750 13 84025297 to 84064772 39475 - lincRNA gene predicted gene, 17750
D13Sh2 13 84026652 to 84026942 290 DNA segment DNA segment, Chr 13, Steve Hardies 2
D13Mit298 13 84030947 to 84031093 146 DNA segment DNA Segment, Chr 13, Massachusetts Institute of Technology-298
Tssr123343 13 84055920 to 84055923 3 - TSS region transcription start site region 123343
Tssr123344 13 84056437 to 84056468 31 - TSS region transcription start site region 123344
Tssr120539 13 84063108 to 84063111 3 + TSS region transcription start site region 120539
Tssr123345 13 84064705 to 84064724 19 - TSS region transcription start site region 123345
Tssr123346 13 84064785 to 84064808 23 - TSS region transcription start site region 123346
Gm8456 13 84166453 to 84166888 435 + pseudogene predicted gene 8456
Gm24331 13 84182278 to 84182344 66 + miRNA gene predicted gene, 24331
A230107N01Rik 13 84219581 to 84222175 2594 - antisense lncRNA gene RIKEN cDNA A230107N01 gene
Cpgi5911 13 84222009 to 84222809 800 CpG island CpG island 5911
Tssr120540 13 84222186 to 84222199 13 + TSS region transcription start site region 120540
Tmem161b 13 84222187 to 84295966 73779 + protein coding gene transmembrane protein 161B
Tssr120541 13 84222286 to 84222356 70 + TSS region transcription start site region 120541
Tssr120542 13 84244110 to 84244114 4 + TSS region transcription start site region 120542