Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:83717575-83967773

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi5904 13 83720821 to 83721314 493 CpG island CpG island 5904
Tssr123336 13 83721149 to 83721155 6 - TSS region transcription start site region 123336
Tssr120521 13 83721282 to 83721285 3 + TSS region transcription start site region 120521
Tssr120522 13 83721290 to 83721309 19 + TSS region transcription start site region 120522
Tssr120523 13 83721329 to 83721344 15 + TSS region transcription start site region 120523
Tssr120524 13 83721357 to 83721384 27 + TSS region transcription start site region 120524
Tssr4133 13 83721396 to 83721401 5 + TSS region transcription start site region 4133
Gm26803 13 83723442 to 83729582 6140 - lincRNA gene predicted gene, 26803
Tssr123337 13 83727169 to 83727187 18 - TSS region transcription start site region 123337
Cpgi5905 13 83727218 to 83727531 313 CpG island CpG island 5905
Tssr120525 13 83727347 to 83727358 11 + TSS region transcription start site region 120525
Tssr120526 13 83727370 to 83727387 17 + TSS region transcription start site region 120526
C130071C03Rik 13 83728106 to 83735669 7563 + lincRNA gene RIKEN cDNA C130071C03 gene
Tssr123338 13 83729132 to 83729135 3 - TSS region transcription start site region 123338
Tssr120527 13 83729457 to 83729468 11 + TSS region transcription start site region 120527
Tssr120528 13 83729475 to 83729494 19 + TSS region transcription start site region 120528
Tssr123339 13 83729544 to 83729584 40 - TSS region transcription start site region 123339
Cpgi5906 13 83729546 to 83729980 434 CpG island CpG island 5906
Tssr123340 13 83729669 to 83729680 11 - TSS region transcription start site region 123340
Tssr123341 13 83729681 to 83729711 30 - TSS region transcription start site region 123341
Cpgi5907 13 83730404 to 83731631 1227 CpG island CpG island 5907
Tssr120529 13 83731378 to 83731394 16 + TSS region transcription start site region 120529
Tssr120530 13 83732367 to 83732370 3 + TSS region transcription start site region 120530
Tssr120531 13 83732438 to 83732465 27 + TSS region transcription start site region 120531
Tssr120532 13 83732563 to 83732574 11 + TSS region transcription start site region 120532
Cpgi5908 13 83732726 to 83733017 291 CpG island CpG island 5908
Gm33366 13 83734709 to 83738535 3826 - unclassified non-coding RNA gene predicted gene, 33366
Cpgi5909 13 83737817 to 83738208 391 CpG island CpG island 5909
Mir9-2 13 83738814 to 83738885 71 + miRNA gene microRNA 9-2
Tssr120533 13 83738874 to 83738887 13 + TSS region transcription start site region 120533
Tssr120534 13 83739049 to 83739065 16 + TSS region transcription start site region 120534
Tssr120535 13 83739184 to 83739189 5 + TSS region transcription start site region 120535
Tssr120536 13 83740188 to 83740201 13 + TSS region transcription start site region 120536
Cpgi5910 13 83744923 to 83745501 578 CpG island CpG island 5910
Gm6411 13 83761138 to 83762335 1197 - pseudogene predicted gene 6411
Tssr120537 13 83801728 to 83801729 1 + TSS region transcription start site region 120537
Tssr120538 13 83832238 to 83832243 5 + TSS region transcription start site region 120538
Gm5452 13 83832340 to 83833336 996 + pseudogene predicted gene 5452
D13Mit69 13 83842575 to 83842773 198 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 69
2810049E08Rik 13 83891208 to 83928710 37502 + lincRNA gene RIKEN cDNA 2810049E08 gene