Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:82804565-83574709

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr123324 13 82950548 to 82950554 6 - TSS region transcription start site region 123324
Tssr4131 13 83042439 to 83042455 16 + TSS region transcription start site region 4131
2310067P03Rik 13 83065457 to 83194347 128890 + lincRNA gene RIKEN cDNA 2310067P03 gene
Gm33073 13 83071680 to 83120537 48857 - lncRNA gene predicted gene, 33073
Gm48156 13 83189565 to 83189709 144 - pseudogene predicted gene, 48156
Gm33217 13 83314533 to 83356400 41867 - lncRNA gene predicted gene, 33217
Tssr123325 13 83379058 to 83379060 2 - TSS region transcription start site region 123325
Gm41010 13 83429231 to 83442790 13559 - lncRNA gene predicted gene, 41010
Gm33274 13 83442914 to 83446408 3494 - lncRNA gene predicted gene, 33274
Gm33317 13 83498349 to 83503901 5552 - lncRNA gene predicted gene, 33317
Tssr123326 13 83503533 to 83503543 10 - TSS region transcription start site region 123326
Tssr120490 13 83504032 to 83504050 18 + TSS region transcription start site region 120490
Mef2c 13 83504034 to 83667079 163045 + protein coding gene myocyte enhancer factor 2C
Tssr120491 13 83504137 to 83504159 22 + TSS region transcription start site region 120491
Tssr120492 13 83504160 to 83504227 67 + TSS region transcription start site region 120492
Tssr120493 13 83504233 to 83504255 22 + TSS region transcription start site region 120493
Tssr120494 13 83504303 to 83504310 7 + TSS region transcription start site region 120494
Cpgi5898 13 83517999 to 83518556 557 CpG island CpG island 5898
Cpgi5899 13 83523643 to 83524025 382 CpG island CpG island 5899
Tssr120495 13 83524271 to 83524289 18 + TSS region transcription start site region 120495
Cpgi5900 13 83524313 to 83524955 642 CpG island CpG island 5900
Tssr120496 13 83524501 to 83524520 19 + TSS region transcription start site region 120496
Tssr120497 13 83524547 to 83524561 14 + TSS region transcription start site region 120497
Tssr120498 13 83524593 to 83524618 25 + TSS region transcription start site region 120498
Tssr120499 13 83524812 to 83524838 26 + TSS region transcription start site region 120499
Tssr120500 13 83524846 to 83524871 25 + TSS region transcription start site region 120500
Tssr120501 13 83525691 to 83525700 9 + TSS region transcription start site region 120501
Tssr123327 13 83571989 to 83572010 21 - TSS region transcription start site region 123327
Tssr4132 13 83572058 to 83572078 20 - TSS region transcription start site region 4132
Tssr123328 13 83572093 to 83572118 25 - TSS region transcription start site region 123328
Tssr123329 13 83572147 to 83572154 7 - TSS region transcription start site region 123329
Tssr120502 13 83572338 to 83572357 19 + TSS region transcription start site region 120502
Tssr120503 13 83572365 to 83572390 25 + TSS region transcription start site region 120503
Tssr120504 13 83572391 to 83572413 22 + TSS region transcription start site region 120504
Tssr120505 13 83573577 to 83573603 26 + TSS region transcription start site region 120505
Tssr120506 13 83574475 to 83574484 9 + TSS region transcription start site region 120506