Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:81208785-83549643

Filter by:
73 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Adgrv1 13 81095068 to 81633154 538086 - protein coding gene adhesion G protein-coupled receptor V1
Tssr123313 13 81238893 to 81238907 14 - TSS region transcription start site region 123313
Gm48566 13 81239177 to 81240784 1607 - unclassified gene predicted gene, 48566
Tssr123314 13 81253095 to 81253098 3 - TSS region transcription start site region 123314
Gm48567 13 81500802 to 81501456 654 + pseudogene predicted gene, 48567
2610312I10Rik 13 81512738 to 81513866 1128 unclassified gene RIKEN cDNA 2610312I10 gene
Tssr123315 13 81545268 to 81545273 5 - TSS region transcription start site region 123315
Tssr123316 13 81570653 to 81570671 18 - TSS region transcription start site region 123316
Cpgi5894 13 81632701 to 81633441 740 CpG island CpG island 5894
Tssr123317 13 81633119 to 81633153 34 - TSS region transcription start site region 123317
Tssr123318 13 81633174 to 81633179 5 - TSS region transcription start site region 123318
Tssr123319 13 81657138 to 81657144 6 - TSS region transcription start site region 123319
Cpgi5895 13 81657254 to 81658183 929 CpG island CpG island 5895
Lysmd3 13 81657663 to 81672871 15208 + protein coding gene LysM, putative peptidoglycan-binding, domain containing 3
Tssr120480 13 81657732 to 81657846 114 + TSS region transcription start site region 120480
Polr3g 13 81673843 to 81711013 37170 - protein coding gene polymerase (RNA) III (DNA directed) polypeptide G
Cpgi5896 13 81710757 to 81712164 1407 CpG island CpG island 5896
Tssr123320 13 81710937 to 81711008 71 - TSS region transcription start site region 123320
Tssr123321 13 81711284 to 81711299 15 - TSS region transcription start site region 123321
Tssr123322 13 81711301 to 81711347 46 - TSS region transcription start site region 123322
Tssr120481 13 81711407 to 81711457 50 + TSS region transcription start site region 120481
Mblac2 13 81711417 to 81753275 41858 + protein coding gene metallo-beta-lactamase domain containing 2
Gm48113 13 81723990 to 81725028 1038 - pseudogene predicted gene, 48113
E130101A01Rik 13 81726899 to 81727570 671 unclassified gene RIKEN cDNA E130101A01 gene
Tssr120482 13 81754206 to 81754215 9 + TSS region transcription start site region 120482
Tssr120483 13 81754218 to 81754228 10 + TSS region transcription start site region 120483
Gm17259 13 81778773 to 81783749 4976 - antisense lncRNA gene predicted gene, 17259
Cpgi5897 13 81782845 to 81783987 1142 CpG island CpG island 5897
Tssr120484 13 81783220 to 81783307 87 + TSS region transcription start site region 120484
Cetn3 13 81783249 to 81797157 13908 + protein coding gene centrin 3
Tssr120485 13 81783308 to 81783325 17 + TSS region transcription start site region 120485
Tssr120486 13 81783527 to 81783564 37 + TSS region transcription start site region 120486
Tssr123323 13 81783608 to 81783653 45 - TSS region transcription start site region 123323
Tssr120487 13 81784173 to 81784176 3 + TSS region transcription start site region 120487
Tssr120488 13 81786857 to 81786873 16 + TSS region transcription start site region 120488
Tssr4130 13 81805491 to 81805494 3 + TSS region transcription start site region 4130
Gm32836 13 81825367 to 81827218 1851 - lncRNA gene predicted gene, 32836
Gm41008 13 81871469 to 81873049 1580 + lncRNA gene predicted gene, 41008
F830210D05Rik 13 81927785 to 81929687 1902 - unclassified gene RIKEN cDNA F830210D05 gene
Gm41009 13 82001868 to 82004830 2962 + lncRNA gene predicted gene, 41009
Gm24295 13 82050751 to 82050881 130 + snoRNA gene predicted gene, 24295
Gm48155 13 82089757 to 82258960 169203 + lincRNA gene predicted gene, 48155
Tssr120489 13 82295427 to 82295432 5 + TSS region transcription start site region 120489
Gm4936 13 82378785 to 82379643 858 - pseudogene predicted gene 4936
D13Mit190.2 13 82393149 to 82393290 141 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 190.2
Mir3961 13 82698275 to 82698333 58 - miRNA gene microRNA 3961
Tssr123324 13 82950548 to 82950554 6 - TSS region transcription start site region 123324
Tssr4131 13 83042439 to 83042455 16 + TSS region transcription start site region 4131
2310067P03Rik 13 83065457 to 83194347 128890 + lincRNA gene RIKEN cDNA 2310067P03 gene
Gm33073 13 83071680 to 83120537 48857 - lncRNA gene predicted gene, 33073
Gm48156 13 83189565 to 83189709 144 - pseudogene predicted gene, 48156
Gm33217 13 83314533 to 83356400 41867 - lncRNA gene predicted gene, 33217
Tssr123325 13 83379058 to 83379060 2 - TSS region transcription start site region 123325
Gm41010 13 83429231 to 83442790 13559 - lncRNA gene predicted gene, 41010
Gm33274 13 83442914 to 83446408 3494 - lncRNA gene predicted gene, 33274
Gm33317 13 83498349 to 83503901 5552 - lncRNA gene predicted gene, 33317
Tssr123326 13 83503533 to 83503543 10 - TSS region transcription start site region 123326
Tssr120490 13 83504032 to 83504050 18 + TSS region transcription start site region 120490
Mef2c 13 83504034 to 83667079 163045 + protein coding gene myocyte enhancer factor 2C
Tssr120491 13 83504137 to 83504159 22 + TSS region transcription start site region 120491
Tssr120492 13 83504160 to 83504227 67 + TSS region transcription start site region 120492
Tssr120493 13 83504233 to 83504255 22 + TSS region transcription start site region 120493
Tssr120494 13 83504303 to 83504310 7 + TSS region transcription start site region 120494
Cpgi5898 13 83517999 to 83518556 557 CpG island CpG island 5898
Cpgi5899 13 83523643 to 83524025 382 CpG island CpG island 5899
Tssr120495 13 83524271 to 83524289 18 + TSS region transcription start site region 120495
Cpgi5900 13 83524313 to 83524955 642 CpG island CpG island 5900
Tssr120496 13 83524501 to 83524520 19 + TSS region transcription start site region 120496
Tssr120497 13 83524547 to 83524561 14 + TSS region transcription start site region 120497
Tssr120498 13 83524593 to 83524618 25 + TSS region transcription start site region 120498
Tssr120499 13 83524812 to 83524838 26 + TSS region transcription start site region 120499
Tssr120500 13 83524846 to 83524871 25 + TSS region transcription start site region 120500
Tssr120501 13 83525691 to 83525700 9 + TSS region transcription start site region 120501