Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:80038009-80948484

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm28526 13 79873085 to 80130468 257383 - lincRNA gene predicted gene 28526
Gm5197 13 80098222 to 80099418 1196 - pseudogene predicted gene 5197
Tssr120465 13 80158662 to 80158665 3 + TSS region transcription start site region 120465
Gm24635 13 80158663 to 80158790 127 + snRNA gene predicted gene, 24635
Gm8371 13 80161328 to 80161879 551 + pseudogene predicted gene 8371
Tssr120466 13 80207653 to 80207656 3 + TSS region transcription start site region 120466
Gm46388 13 80493009 to 80493484 475 + pseudogene predicted gene, 46388
D13Mit125 13 80722755 to 80722947 192 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 125
D13Mit103 13 80759095 to 80759230 135 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 103
D13Mit102 13 80868090 to 80868307 217 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 102
Cpgi5891 13 80882728 to 80883538 810 CpG island CpG island 5891
Tssr4125 13 80883358 to 80883376 18 + TSS region transcription start site region 4125
Tssr4126 13 80883379 to 80883386 7 + TSS region transcription start site region 4126
Arrdc3 13 80883384 to 80896042 12658 + protein coding gene arrestin domain containing 3
Tssr120467 13 80883395 to 80883398 3 + TSS region transcription start site region 120467
Tssr120468 13 80883403 to 80883422 19 + TSS region transcription start site region 120468
Tssr4127 13 80883540 to 80883550 10 + TSS region transcription start site region 4127
1700023H06Rik 13 80884224 to 80885524 1300 - unclassified gene RIKEN cDNA 1700023H06 gene
Tssr123306 13 80884726 to 80884745 19 - TSS region transcription start site region 123306
Tssr4128 13 80884920 to 80884952 32 + TSS region transcription start site region 4128
Cpgi5892 13 80885405 to 80886553 1148 CpG island CpG island 5892
Tssr123307 13 80885509 to 80885532 23 - TSS region transcription start site region 123307
Tssr123308 13 80885548 to 80885559 11 - TSS region transcription start site region 123308
Tssr123309 13 80885597 to 80885617 20 - TSS region transcription start site region 123309
Tssr120469 13 80885665 to 80885680 15 + TSS region transcription start site region 120469
Tssr120470 13 80885685 to 80885711 26 + TSS region transcription start site region 120470
Tssr120471 13 80885745 to 80885765 20 + TSS region transcription start site region 120471
Tssr123310 13 80886002 to 80886040 38 - TSS region transcription start site region 123310
Tssr120472 13 80886160 to 80886201 41 + TSS region transcription start site region 120472
Tssr120473 13 80886221 to 80886251 30 + TSS region transcription start site region 120473
Tssr120474 13 80886288 to 80886312 24 + TSS region transcription start site region 120474
Tssr120475 13 80886491 to 80886504 13 + TSS region transcription start site region 120475
Tssr120476 13 80893797 to 80893807 10 + TSS region transcription start site region 120476
5430425K12Rik 13 80940411 to 80948597 8186 + lincRNA gene RIKEN cDNA 5430425K12 gene
Tssr4129 13 80941113 to 80941124 11 + TSS region transcription start site region 4129