Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:78216143-80666407

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
A830082K12Rik 13 78198017 to 78236564 38547 + antisense lncRNA gene RIKEN cDNA A830082K12 gene
Tssr120463 13 78235181 to 78235189 8 + TSS region transcription start site region 120463
Gm5042 13 78273469 to 78273952 483 - pseudogene predicted gene 5042
Tssr4123 13 78273989 to 78273992 3 - TSS region transcription start site region 4123
Gm46387 13 78275221 to 78275639 418 - pseudogene predicted gene, 46387
Gm3963 13 78286637 to 78287084 447 - pseudogene predicted gene 3963
Gm41007 13 78316330 to 78319403 3073 + lncRNA gene predicted gene, 41007
Gm6317 13 78372987 to 78379128 6141 - pseudogene predicted gene 6317
Gm48399 13 78374179 to 78384198 10019 + lincRNA gene predicted gene, 48399
Gm31946 13 78427248 to 78442524 15276 + lincRNA gene predicted gene, 31946
Gm32067 13 78483354 to 78562570 79216 + lincRNA gene predicted gene, 32067
Tssr120464 13 78590551 to 78590554 3 + TSS region transcription start site region 120464
Gm48402 13 78638017 to 78643064 5047 + lincRNA gene predicted gene, 48402
D13Mit201 13 78680726 to 78680851 125 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 201
D13Mit225 13 78688559 to 78688681 122 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 225
Gm8345 13 78953082 to 78954148 1066 - pseudogene predicted gene 8345
Tssr123305 13 78954846 to 78954866 20 - TSS region transcription start site region 123305
Tssr4124 13 79022615 to 79022616 1 + TSS region transcription start site region 4124
Gm25383 13 79161719 to 79161862 143 + snoRNA gene predicted gene, 25383
Gm29318 13 79285712 to 79298242 12530 + lincRNA gene predicted gene 29318
Gm38349 13 79294878 to 79295339 461 - unclassified gene predicted gene, 38349
Gm48470 13 79441143 to 79441407 264 - pseudogene predicted gene, 48470
Gm24863 13 79454970 to 79455076 106 + snRNA gene predicted gene, 24863
Gm48471 13 79838077 to 79838843 766 + pseudogene predicted gene, 48471
Gm28526 13 79873085 to 80130468 257383 - lincRNA gene predicted gene 28526
Gm19320 13 79878462 to 79878934 472 + pseudogene predicted gene, 19320
Gm5197 13 80098222 to 80099418 1196 - pseudogene predicted gene 5197
Tssr120465 13 80158662 to 80158665 3 + TSS region transcription start site region 120465
Gm24635 13 80158663 to 80158790 127 + snRNA gene predicted gene, 24635
Gm8371 13 80161328 to 80161879 551 + pseudogene predicted gene 8371
Tssr120466 13 80207653 to 80207656 3 + TSS region transcription start site region 120466
Gm46388 13 80493009 to 80493484 475 + pseudogene predicted gene, 46388