MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:78156630-78197973

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Fam172a	13	77708678 to 78166240	457562	+	protein coding gene	family with sequence similarity 172, member A
Gm38604	13	78131880 to 78185910	54030	-	antisense lncRNA gene	predicted gene, 38604
A730087J23Rik	13	78161106 to 78163919	2813		unclassified non-coding RNA gene	RIKEN cDNA A730087J23 gene
Cpgi5883	13	78163042 to 78164105	1063		CpG island	CpG island 5883
Tssr120456	13	78163097 to 78163106	9	+	TSS region	transcription start site region 120456
3110006O06Rik	13	78171630 to 78182973	11343	+	lincRNA gene	RIKEN cDNA 3110006O06 gene
Cpgi5884	13	78179285 to 78179715	430		CpG island	CpG island 5884
Cpgi5885	13	78181136 to 78181465	329		CpG island	CpG island 5885
Tssr123280	13	78183109 to 78183115	6	-	TSS region	transcription start site region 123280
Tssr123281	13	78183122 to 78183134	12	-	TSS region	transcription start site region 123281
Tssr123282	13	78183145 to 78183176	31	-	TSS region	transcription start site region 123282
Tssr123283	13	78183182 to 78183197	15	-	TSS region	transcription start site region 123283
Nr2f1	13	78188971 to 78198982	10011	-	protein coding gene	nuclear receptor subfamily 2, group F, member 1
Cpgi5886	13	78194541 to 78195907	1366		CpG island	CpG island 5886
Tssr123284	13	78196426 to 78196440	14	-	TSS region	transcription start site region 123284
Tssr123285	13	78196477 to 78196486	9	-	TSS region	transcription start site region 123285
Cpgi5887	13	78197732 to 78199782	2050		CpG island	CpG island 5887
Tssr123286	13	78197815 to 78197850	35	-	TSS region	transcription start site region 123286