Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:75980622-77040671

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72 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sgp3 13 56322643 to 76823195 20500552 QTL serum gp70 production 3
Spata9 13 75967150 to 75998972 31822 + protein coding gene spermatogenesis associated 9
Wra1 13 75984481 to 75984619 138 QTL wheel running activity 1
D13Mit254 13 75984481 to 75984619 138 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 254
Rfesd 13 76001535 to 76018712 17177 - protein coding gene Rieske (Fe-S) domain containing
Tssr123260 13 76017546 to 76017563 17 - TSS region transcription start site region 123260
Cpgi5877 13 76018077 to 76018841 764 CpG island CpG island 5877
Tssr123261 13 76018524 to 76018605 81 - TSS region transcription start site region 123261
Tssr123262 13 76018704 to 76018747 43 - TSS region transcription start site region 123262
Tssr120416 13 76018755 to 76018777 22 + TSS region transcription start site region 120416
Gm4165 13 76019807 to 76020110 303 - pseudogene predicted gene 4165
Gpr150 13 76054851 to 76056996 2145 - protein coding gene G protein-coupled receptor 150
Cpgi5878 13 76055415 to 76056971 1556 CpG island CpG island 5878
Tssr120417 13 76055687 to 76055737 50 + TSS region transcription start site region 120417
Tssr123263 13 76056339 to 76056353 14 - TSS region transcription start site region 123263
Arsk 13 76060422 to 76098660 38238 - protein coding gene arylsulfatase K
Gm41006 13 76065583 to 76066279 696 + lncRNA gene predicted gene, 41006
Gm31161 13 76068778 to 76071938 3160 + lncRNA gene predicted gene, 31161
Cpgi5879 13 76098271 to 76099145 874 CpG island CpG island 5879
Tssr123264 13 76098569 to 76098605 36 - TSS region transcription start site region 123264
Tssr123265 13 76098606 to 76098658 52 - TSS region transcription start site region 123265
Ttc37 13 76098734 to 76190316 91582 + protein coding gene tetratricopeptide repeat domain 37
Tssr120418 13 76098763 to 76098774 11 + TSS region transcription start site region 120418
Tssr120419 13 76098775 to 76098809 34 + TSS region transcription start site region 120419
Tssr120420 13 76099878 to 76099881 3 + TSS region transcription start site region 120420
Tssr120421 13 76115272 to 76115278 6 + TSS region transcription start site region 120421
Tssr120422 13 76130193 to 76130202 9 + TSS region transcription start site region 120422
Tssr120423 13 76130268 to 76130295 27 + TSS region transcription start site region 120423
Tssr120424 13 76189073 to 76189079 6 + TSS region transcription start site region 120424
Gm48639 13 76198991 to 76200866 1875 + unclassified gene predicted gene, 48639
Fam81b 13 76201708 to 76278919 77211 - protein coding gene family with sequence similarity 81, member B
Gm31219 13 76255947 to 76278968 23021 + antisense lncRNA gene predicted gene, 31219
Tssr123266 13 76256538 to 76256573 35 - TSS region transcription start site region 123266
Tssr123267 13 76271315 to 76271319 4 - TSS region transcription start site region 123267
Tssr123268 13 76271320 to 76271358 38 - TSS region transcription start site region 123268
Tssr123269 13 76271906 to 76271913 7 - TSS region transcription start site region 123269
Tssr123270 13 76271938 to 76271953 15 - TSS region transcription start site region 123270
Gm31516 13 76300825 to 76308553 7728 + lncRNA gene predicted gene, 31516
Gm24025 13 76321204 to 76321279 75 - miRNA gene predicted gene, 24025
Tssr120425 13 76340734 to 76340745 11 + TSS region transcription start site region 120425
Cpgi5880 13 76383815 to 76385395 1580 CpG island CpG island 5880
Tssr120426 13 76384078 to 76384089 11 + TSS region transcription start site region 120426
Tssr120427 13 76384133 to 76384150 17 + TSS region transcription start site region 120427
Tssr120428 13 76384196 to 76384209 13 + TSS region transcription start site region 120428
Tssr120429 13 76384353 to 76384392 39 + TSS region transcription start site region 120429
Mctp1 13 76384535 to 77031810 647275 + protein coding gene multiple C2 domains, transmembrane 1
Tssr123271 13 76385238 to 76385248 10 - TSS region transcription start site region 123271
Gm18314 13 76414386 to 76415344 958 - pseudogene predicted gene, 18314
Tssr120430 13 76420568 to 76420575 7 + TSS region transcription start site region 120430
Gm48078 13 76439331 to 76439670 339 + pseudogene predicted gene, 48078
Tssr120431 13 76443670 to 76443675 5 + TSS region transcription start site region 120431
D13Dcr13 13 76455691 to 76455787 96 DNA segment DNA Segment, Chr 13, Derry C. Roopenian 13
Tssr120432 13 76456550 to 76456575 25 + TSS region transcription start site region 120432
Tssr120433 13 76472172 to 76472181 9 + TSS region transcription start site region 120433
Gm46431 13 76507644 to 76516272 8628 + lncRNA gene predicted gene, 46431
Tssr120434 13 76510622 to 76510671 49 + TSS region transcription start site region 120434
Tssr120435 13 76579589 to 76579622 33 + TSS region transcription start site region 120435
Tssr120436 13 76579670 to 76579678 8 + TSS region transcription start site region 120436
Tssr120437 13 76579681 to 76579686 5 + TSS region transcription start site region 120437
Gm24519 13 76604319 to 76604450 131 - snoRNA gene predicted gene, 24519
Gm21959 13 76683982 to 76684433 451 - pseudogene predicted gene, 21959
Gm15740 13 76696619 to 76697907 1288 + pseudogene predicted gene 15740
Gm18563 13 76700328 to 76702010 1682 - pseudogene predicted gene, 18563
D13Mit99 13 76799396 to 76799600 204 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 99
Tssr4121 13 76803716 to 76803718 2 + TSS region transcription start site region 4121
Tssr120438 13 76817399 to 76817403 4 + TSS region transcription start site region 120438
D13Mit97 13 76823046 to 76823195 149 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 97
Tssr120439 13 76825198 to 76825208 10 + TSS region transcription start site region 120439
Tssr120440 13 76891465 to 76891513 48 + TSS region transcription start site region 120440
Tssr120441 13 76935095 to 76935110 15 + TSS region transcription start site region 120441
Gm8185 13 76935163 to 76935831 668 + pseudogene predicted gene 8185
Mol3 13 112294569 to 75984481 -36310088 QTL modifier of LPS-response 3