Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:75774537-76038824

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr120399 13 75789850 to 75789853 3 + TSS region transcription start site region 120399
Tssr120400 13 75794527 to 75794560 33 + TSS region transcription start site region 120400
Cpgi5874 13 75797815 to 75798109 294 CpG island CpG island 5874
Gm8288 13 75802705 to 75803294 589 + pseudogene predicted gene 8288
Gm41005 13 75818226 to 75847161 28935 - lncRNA gene predicted gene, 41005
Tssr4119 13 75825176 to 75825190 14 + TSS region transcription start site region 4119
Tssr123252 13 75835492 to 75835497 5 - TSS region transcription start site region 123252
Glrx 13 75839873 to 75850151 10278 + protein coding gene glutaredoxin
Tssr120401 13 75839874 to 75839881 7 + TSS region transcription start site region 120401
Tssr120402 13 75839897 to 75839928 31 + TSS region transcription start site region 120402
Tssr120403 13 75840002 to 75840044 42 + TSS region transcription start site region 120403
Tssr120404 13 75840071 to 75840085 14 + TSS region transcription start site region 120404
Tssr120405 13 75845096 to 75845100 4 + TSS region transcription start site region 120405
Tssr120406 13 75845626 to 75845632 6 + TSS region transcription start site region 120406
Tssr120407 13 75847168 to 75847191 23 + TSS region transcription start site region 120407
Tssr120408 13 75849316 to 75849327 11 + TSS region transcription start site region 120408
Tssr120409 13 75849339 to 75849368 29 + TSS region transcription start site region 120409
Tssr120410 13 75849374 to 75849383 9 + TSS region transcription start site region 120410
Tssr120411 13 75849415 to 75849432 17 + TSS region transcription start site region 120411
Rhobtb3 13 75869537 to 75943824 74287 - protein coding gene Rho-related BTB domain containing 3
Gm24163 13 75905147 to 75905278 131 + snoRNA gene predicted gene, 24163
Tssr4120 13 75906862 to 75906863 1 + TSS region transcription start site region 4120
D13Ertd219e 13 75914553 to 75914785 232 DNA segment DNA segment, Chr 13, ERATO Doi 219, expressed
Tssr123253 13 75920799 to 75920801 2 - TSS region transcription start site region 123253
Gm15528 13 75929465 to 75930328 863 - pseudogene predicted gene 15528
Tssr123254 13 75930037 to 75930057 20 - TSS region transcription start site region 123254
Cpgi5875 13 75930073 to 75930410 337 CpG island CpG island 5875
Tssr123255 13 75930235 to 75930242 7 - TSS region transcription start site region 123255
Tssr123256 13 75942294 to 75942298 4 - TSS region transcription start site region 123256
Cpgi5876 13 75943105 to 75944189 1084 CpG island CpG island 5876
Tssr120412 13 75943257 to 75943273 16 + TSS region transcription start site region 120412
Tssr123257 13 75943674 to 75943696 22 - TSS region transcription start site region 123257
Tssr123258 13 75943700 to 75943760 60 - TSS region transcription start site region 123258
Tssr123259 13 75943812 to 75943950 138 - TSS region transcription start site region 123259
Gm6311 13 75954136 to 75955013 877 + pseudogene predicted gene 6311
Tssr120413 13 75962463 to 75962466 3 + TSS region transcription start site region 120413
Gm23319 13 75963657 to 75963787 130 - snoRNA gene predicted gene, 23319
Spata9 13 75967150 to 75998972 31822 + protein coding gene spermatogenesis associated 9
Tssr120414 13 75967704 to 75967753 49 + TSS region transcription start site region 120414
Tssr120415 13 75967756 to 75967789 33 + TSS region transcription start site region 120415
Wra1 13 75984481 to 75984619 138 QTL wheel running activity 1
D13Mit254 13 75984481 to 75984619 138 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 254
Rfesd 13 76001535 to 76018712 17177 - protein coding gene Rieske (Fe-S) domain containing
Tssr123260 13 76017546 to 76017563 17 - TSS region transcription start site region 123260
Cpgi5877 13 76018077 to 76018841 764 CpG island CpG island 5877
Tssr123261 13 76018524 to 76018605 81 - TSS region transcription start site region 123261
Tssr123262 13 76018704 to 76018747 43 - TSS region transcription start site region 123262
Tssr120416 13 76018755 to 76018777 22 + TSS region transcription start site region 120416
Gm4165 13 76019807 to 76020110 303 - pseudogene predicted gene 4165
Mol3 13 112294569 to 75984481 -36310088 QTL modifier of LPS-response 3