Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:74804214-75594943

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cast 13 74692368 to 74808810 116442 - protein coding gene calpastatin
Cpgi5871 13 74807563 to 74808724 1161 CpG island CpG island 5871
Tssr123242 13 74807884 to 74807899 15 - TSS region transcription start site region 123242
Tssr123243 13 74807913 to 74807989 76 - TSS region transcription start site region 123243
Tssr123244 13 74808527 to 74808540 13 - TSS region transcription start site region 123244
Tssr123245 13 74808544 to 74808558 14 - TSS region transcription start site region 123245
Tssr123246 13 74808559 to 74808572 13 - TSS region transcription start site region 123246
Tssr123247 13 74808610 to 74808680 70 - TSS region transcription start site region 123247
Tssr123248 13 74808733 to 74808754 21 - TSS region transcription start site region 123248
Tssr123249 13 74808761 to 74808772 11 - TSS region transcription start site region 123249
Tssr123250 13 74808807 to 74808849 42 - TSS region transcription start site region 123250
Tssr123251 13 74808852 to 74808887 35 - TSS region transcription start site region 123251
Hnrnpa1l2-ps 13 74864305 to 74865356 1051 + pseudogene heterogeneous nuclear ribonucleoprotein A1-like 2, pseudogene
D13Mit257 13 74913481 to 74913597 116 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 257
Gm30867 13 74995715 to 75012756 17041 - lncRNA gene predicted gene, 30867
Tssr120364 13 75089369 to 75089380 11 + TSS region transcription start site region 120364
Tssr120365 13 75089638 to 75089655 17 + TSS region transcription start site region 120365
Tssr120366 13 75089675 to 75089682 7 + TSS region transcription start site region 120366
Tssr120367 13 75089820 to 75089833 13 + TSS region transcription start site region 120367
Pcsk1 13 75089826 to 75134861 45035 + protein coding gene proprotein convertase subtilisin/kexin type 1
Tssr120368 13 75089846 to 75089886 40 + TSS region transcription start site region 120368
Tssr120369 13 75089899 to 75089918 19 + TSS region transcription start site region 120369
Tssr120370 13 75089947 to 75089959 12 + TSS region transcription start site region 120370
Cpgi5872 13 75090189 to 75090362 173 CpG island CpG island 5872
Gm19095 13 75199214 to 75199943 729 + pseudogene predicted gene, 19095
Gm48234 13 75479195 to 75479387 192 - pseudogene predicted gene, 48234
Gm48235 13 75509279 to 75510047 768 + pseudogene predicted gene, 48235
Gm8278 13 75515897 to 75518414 2517 - pseudogene predicted gene 8278
Gm3926 13 75523226 to 75524348 1122 - pseudogene predicted gene 3926