Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:74403807-74723827

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm47428 13 74404183 to 74406737 2554 - antisense lncRNA gene predicted gene, 47428
Tssr120355 13 74406387 to 74406396 9 + TSS region transcription start site region 120355
Ftl1-ps1 13 74406397 to 74407325 928 + pseudogene ferritin light polypeptide 1, pseudogene 1
Tssr120356 13 74406984 to 74407002 18 + TSS region transcription start site region 120356
Mir692-3 13 74407065 to 74407173 108 + miRNA gene microRNA 692-3
Gm41004 13 74408984 to 74416668 7684 - lncRNA gene predicted gene, 41004
E430024I08Rik 13 74434781 to 74463429 28648 - lincRNA gene RIKEN cDNA E430024I08 gene
Cpgi5866 13 74439918 to 74440261 343 CpG island CpG island 5866
Gm47435 13 74440166 to 74440532 366 + pseudogene predicted gene, 47435
Tssr123221 13 74462658 to 74462704 46 - TSS region transcription start site region 123221
Gm49762 13 74474643 to 74476068 1425 + lincRNA gene predicted gene, 49762
Zfp825 13 74480054 to 74493992 13938 - protein coding gene zinc finger protein 825
Tssr123222 13 74493936 to 74493999 63 - TSS region transcription start site region 123222
Cpgi5867 13 74493959 to 74494129 170 CpG island CpG island 5867
Tssr120357 13 74494061 to 74494093 32 + TSS region transcription start site region 120357
Gm49763 13 74494143 to 74498470 4327 + antisense lncRNA gene predicted gene, 49763
Gm20590 13 74505022 to 74570556 65534 - pseudogene predicted gene, 20590
Gm47467 13 74509598 to 74522461 12863 - lincRNA gene predicted gene, 47467
Tssr123223 13 74522423 to 74522443 20 - TSS region transcription start site region 123223
Tssr4116 13 74533514 to 74533557 43 + TSS region transcription start site region 4116
Gm5626 13 74533526 to 74534583 1057 + pseudogene predicted gene 5626
Tssr120358 13 74546548 to 74546582 34 + TSS region transcription start site region 120358
Gm47469 13 74553910 to 74564256 10346 - lincRNA gene predicted gene, 47469
Tssr123224 13 74562089 to 74562092 3 - TSS region transcription start site region 123224
Tssr123225 13 74563807 to 74563827 20 - TSS region transcription start site region 123225
Tssr123226 13 74563843 to 74563861 18 - TSS region transcription start site region 123226
Gm47470 13 74570447 to 74570555 108 - pseudogene predicted gene, 47470
Tssr123227 13 74591363 to 74591397 34 - TSS region transcription start site region 123227
Gm46430 13 74604421 to 74618221 13800 - lincRNA gene predicted gene, 46430
Tssr120359 13 74609225 to 74609237 12 + TSS region transcription start site region 120359
Tssr123228 13 74617265 to 74617284 19 - TSS region transcription start site region 123228
Tssr123229 13 74617289 to 74617326 37 - TSS region transcription start site region 123229
Tssr120360 13 74617811 to 74617834 23 + TSS region transcription start site region 120360
Erap1 13 74639624 to 74692537 52913 + protein coding gene endoplasmic reticulum aminopeptidase 1
Cpgi5869 13 74639761 to 74640409 648 CpG island CpG island 5869
Tssr120361 13 74639834 to 74639864 30 + TSS region transcription start site region 120361
Tssr120362 13 74639866 to 74639878 12 + TSS region transcription start site region 120362
Tssr120363 13 74692220 to 74692237 17 + TSS region transcription start site region 120363
Cast 13 74692368 to 74808810 116442 - protein coding gene calpastatin