Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:7407885-8997918

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68 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm36074 13 7446509 to 7465343 18834 + lincRNA gene predicted gene, 36074
Tssr118291 13 7446519 to 7446539 20 + TSS region transcription start site region 118291
D13Mit300 13 7469636 to 7469736 100 DNA segment DNA Segment, Chr 13 Massachusetts Institute of Technology 300
Gm36136 13 7507318 to 7510231 2913 + lncRNA gene predicted gene, 36136
Gm48251 13 7633044 to 7633191 147 + pseudogene predicted gene, 48251
Gm48252 13 7753170 to 7753278 108 - pseudogene predicted gene, 48252
Gm48253 13 7803436 to 7804714 1278 - unclassified gene predicted gene, 48253
Gm9742 13 8029503 to 8031353 1850 - pseudogene predicted gene 9742
Cpgi5258 13 8031444 to 8031618 174 CpG island CpG island 5258
Gm5191 13 8128133 to 8129368 1235 + pseudogene predicted gene 5191
Gm48257 13 8199247 to 8200494 1247 - lincRNA gene predicted gene, 48257
Tssr118292 13 8202860 to 8202871 11 + TSS region transcription start site region 118292
Adarb2 13 8202866 to 8768747 565881 + protein coding gene adenosine deaminase, RNA-specific, B2
Tssr118293 13 8202885 to 8202918 33 + TSS region transcription start site region 118293
Tssr118294 13 8202922 to 8202935 13 + TSS region transcription start site region 118294
Tssr118295 13 8243744 to 8243747 3 + TSS region transcription start site region 118295
Gm48259 13 8278604 to 8279289 685 + unclassified gene predicted gene, 48259
Tssr118296 13 8279127 to 8279141 14 + TSS region transcription start site region 118296
Gm48261 13 8282248 to 8286103 3855 + unclassified gene predicted gene, 48261
Gm10357 13 8289850 to 8290113 263 - pseudogene predicted gene 10357
Tssr118297 13 8292966 to 8292979 13 + TSS region transcription start site region 118297
Gm48260 13 8295315 to 8299143 3828 - pseudogene predicted gene, 48260
Tssr118298 13 8301495 to 8301500 5 + TSS region transcription start site region 118298
Gm48262 13 8553020 to 8557635 4615 + unclassified gene predicted gene, 48262
D13Mit80 13 8758176 to 8758321 145 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 80
Gm48327 13 8797302 to 8798402 1100 - unclassified gene predicted gene, 48327
Wdr37 13 8802968 to 8871909 68941 - protein coding gene WD repeat domain 37
Tssr121338 13 8815995 to 8816010 15 - TSS region transcription start site region 121338
Gm48375 13 8833099 to 8834372 1273 - unclassified gene predicted gene, 48375
Tssr121339 13 8852004 to 8852030 26 - TSS region transcription start site region 121339
Tssr121340 13 8858795 to 8858829 34 - TSS region transcription start site region 121340
Gm48374 13 8870341 to 8872105 1764 + unclassified gene predicted gene, 48374
Cpgi5259 13 8870514 to 8871551 1037 CpG island CpG island 5259
Tssr121341 13 8870967 to 8870974 7 - TSS region transcription start site region 121341
Tssr121342 13 8870999 to 8871058 59 - TSS region transcription start site region 121342
Tssr121343 13 8871667 to 8871680 13 - TSS region transcription start site region 121343
Tssr121344 13 8871696 to 8871749 53 - TSS region transcription start site region 121344
Tssr121345 13 8871751 to 8871762 11 - TSS region transcription start site region 121345
Gm48574 13 8884914 to 8885823 909 - unclassified gene predicted gene, 48574
Cpgi5260 13 8885532 to 8886243 711 CpG island CpG island 5260
Tssr118299 13 8885605 to 8885626 21 + TSS region transcription start site region 118299
Idi1 13 8885606 to 8892396 6790 + protein coding gene isopentenyl-diphosphate delta isomerase
Tssr118300 13 8885632 to 8885656 24 + TSS region transcription start site region 118300
Tssr118301 13 8885663 to 8885674 11 + TSS region transcription start site region 118301
Tssr118302 13 8885885 to 8885893 8 + TSS region transcription start site region 118302
Tssr118303 13 8885897 to 8885935 38 + TSS region transcription start site region 118303
Tssr118304 13 8885937 to 8885980 43 + TSS region transcription start site region 118304
Gm22750 13 8921336 to 8921438 102 - miRNA gene predicted gene, 22750
Cpgi5261 13 8931969 to 8932352 383 CpG island CpG island 5261
Rpl10a-ps2 13 8940336 to 8940977 641 - pseudogene ribosomal protein L10A, pseudogene 2
Gm9745 13 8941575 to 8948231 6656 - protein coding gene predicted gene 9745
Gm25274 13 8945045 to 8945179 134 + snoRNA gene predicted gene, 25274
Gm22115 13 8949921 to 8950053 132 - snoRNA gene predicted gene, 22115
Tssr3987 13 8952860 to 8952867 7 + TSS region transcription start site region 3987
Idi2 13 8952863 to 8960935 8072 + protein coding gene isopentenyl-diphosphate delta isomerase 2
Gm23923 13 8955932 to 8956064 132 - snoRNA gene predicted gene, 23923
Tssr118305 13 8965776 to 8965780 4 + TSS region transcription start site region 118305
Gm48649 13 8966705 to 8968082 1377 + pseudogene predicted gene, 48649
Gtpbp4 13 8972070 to 8996532 24462 - protein coding gene GTP binding protein 4
Tssr121346 13 8974526 to 8974531 5 - TSS region transcription start site region 121346
Tssr121347 13 8977377 to 8977390 13 - TSS region transcription start site region 121347
Tssr121348 13 8979965 to 8979984 19 - TSS region transcription start site region 121348
Gm48650 13 8993005 to 8993238 233 + pseudogene predicted gene, 48650
Cpgi5262 13 8995590 to 8996635 1045 CpG island CpG island 5262
Tssr118306 13 8995591 to 8995611 20 + TSS region transcription start site region 118306
Tssr121349 13 8996004 to 8996052 48 - TSS region transcription start site region 121349
Tssr121350 13 8996057 to 8996068 11 - TSS region transcription start site region 121350
Tssr3988 13 8996156 to 8996209 53 + TSS region transcription start site region 3988