Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:73859419-74185753

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm30432 13 73858455 to 73860338 1883 + lncRNA gene predicted gene, 30432
Tssr4115 13 73870745 to 73870747 2 + TSS region transcription start site region 4115
Trip13 13 73912450 to 73937810 25360 - protein coding gene thyroid hormone receptor interactor 13
Gm25197 13 73924585 to 73924710 125 - miRNA gene predicted gene, 25197
Cpgi5856 13 73937102 to 73938229 1127 CpG island CpG island 5856
Tssr123199 13 73937655 to 73937715 60 - TSS region transcription start site region 123199
Tssr123200 13 73937719 to 73937744 25 - TSS region transcription start site region 123200
Tssr123201 13 73937761 to 73937787 26 - TSS region transcription start site region 123201
Tssr120339 13 73937784 to 73937795 11 + TSS region transcription start site region 120339
Tssr120340 13 73937799 to 73937880 81 + TSS region transcription start site region 120340
Brd9 13 73937811 to 73960895 23084 + protein coding gene bromodomain containing 9
Tssr120341 13 73938122 to 73938147 25 + TSS region transcription start site region 120341
Tssr120342 13 73956571 to 73956572 1 + TSS region transcription start site region 120342
Gm41002 13 73958941 to 73963733 4792 - antisense lncRNA gene predicted gene, 41002
Tssr123202 13 73963728 to 73963737 9 - TSS region transcription start site region 123202
Tssr120343 13 73963844 to 73963847 3 + TSS region transcription start site region 120343
Zdhhc11 13 73963847 to 73992985 29138 + protein coding gene zinc finger, DHHC domain containing 11
Tssr120344 13 73963853 to 73963888 35 + TSS region transcription start site region 120344
Gm10126 13 73988966 to 73989133 167 - pseudogene predicted gene 10126
Gm15912 13 74008009 to 74009354 1345 - unclassified non-coding RNA gene predicted gene 15912
D13Mit8.1 13 74008635 to 74008758 123 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 8.1
Cpgi5857 13 74008871 to 74010489 1618 CpG island CpG island 5857
Tssr123203 13 74009303 to 74009327 24 - TSS region transcription start site region 123203
Tssr123204 13 74009335 to 74009359 24 - TSS region transcription start site region 123204
Tppp 13 74009419 to 74035753 26334 + protein coding gene tubulin polymerization promoting protein
Tssr120345 13 74009430 to 74009453 23 + TSS region transcription start site region 120345
Tssr120346 13 74009460 to 74009483 23 + TSS region transcription start site region 120346
Gm6263 13 74018793 to 74020134 1341 - pseudogene predicted gene 6263
Tssr123205 13 74020202 to 74020206 4 - TSS region transcription start site region 123205
Cep72 13 74036500 to 74062299 25799 - protein coding gene centrosomal protein 72
Cpgi5858 13 74061959 to 74062557 598 CpG island CpG island 5858
Tssr123206 13 74062262 to 74062315 53 - TSS region transcription start site region 123206
Tssr120347 13 74062408 to 74062410 2 + TSS region transcription start site region 120347
0610040A22Rik 13 74120826 to 74121996 1170 unclassified gene RIKEN cDNA 0610040A22 gene
Cpgi5859 13 74121016 to 74121745 729 CpG island CpG island 5859
Tssr120348 13 74121405 to 74121421 16 + TSS region transcription start site region 120348
Tssr120349 13 74121435 to 74121446 11 + TSS region transcription start site region 120349
Slc9a3 13 74121457 to 74169442 47985 + protein coding gene solute carrier family 9 (sodium/hydrogen exchanger), member 3
Gm41003 13 74122101 to 74131263 9162 + lncRNA gene predicted gene, 41003
Tssr120350 13 74122518 to 74122534 16 + TSS region transcription start site region 120350
Cpgi5860 13 74166816 to 74167188 372 CpG island CpG island 5860
Exoc3 13 74169802 to 74208729 38927 - protein coding gene exocyst complex component 3