Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:73291987-73643115

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D13Mit143.1 13 73313133 to 73313307 174 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 143.1
D13Mit143 13 73313310 to 73313452 142 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 143
Tssr120314 13 73317814 to 73317830 16 + TSS region transcription start site region 120314
Gm10263 13 73317844 to 73318143 299 + pseudogene predicted gene 10263
Ndufs6 13 73319876 to 73328482 8606 - protein coding gene NADH:ubiquinone oxidoreductase core subunit S6
Tssr123174 13 73327960 to 73327976 16 - TSS region transcription start site region 123174
Cpgi5844 13 73328158 to 73328699 541 CpG island CpG island 5844
Tssr123175 13 73328442 to 73328467 25 - TSS region transcription start site region 123175
Tssr120315 13 73328485 to 73328509 24 + TSS region transcription start site region 120315
Tssr120316 13 73328510 to 73328553 43 + TSS region transcription start site region 120316
Cpgi5845 13 73330859 to 73331679 820 CpG island CpG island 5845
Tssr120317 13 73330982 to 73331057 75 + TSS region transcription start site region 120317
Mrpl36 13 73331009 to 73332178 1169 + protein coding gene mitochondrial ribosomal protein L36
Tssr123176 13 73344245 to 73344251 6 - TSS region transcription start site region 123176
Eprn 13 73344665 to 73347384 2719 - lincRNA gene ephemeron, early developmental lncRNA
Tssr123177 13 73346289 to 73346296 7 - TSS region transcription start site region 123177
Tssr123178 13 73346916 to 73346925 9 - TSS region transcription start site region 123178
Tssr123179 13 73346931 to 73346940 9 - TSS region transcription start site region 123179
Tssr123180 13 73346961 to 73346976 15 - TSS region transcription start site region 123180
Tssr123181 13 73347255 to 73347264 9 - TSS region transcription start site region 123181
Tssr123182 13 73347286 to 73347297 11 - TSS region transcription start site region 123182
Tssr123183 13 73347340 to 73347365 25 - TSS region transcription start site region 123183
Tssr123184 13 73347373 to 73347385 12 - TSS region transcription start site region 123184
Cpgi5846 13 73365673 to 73366110 437 CpG island CpG island 5846
Cpgi5847 13 73405839 to 73406134 295 CpG island CpG island 5847
D13Mit1002 13 73444717 to 73444900 183 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 1002
Cpgi5848 13 73466987 to 73468115 1128 CpG island CpG island 5848
Lpcat1 13 73467209 to 73516420 49211 + protein coding gene lysophosphatidylcholine acyltransferase 1
Tssr120318 13 73467214 to 73467316 102 + TSS region transcription start site region 120318
Tssr120319 13 73467348 to 73467349 1 + TSS region transcription start site region 120319
Tssr120320 13 73496521 to 73496524 3 + TSS region transcription start site region 120320
Tssr120321 13 73498425 to 73498448 23 + TSS region transcription start site region 120321
Tssr120322 13 73502885 to 73502888 3 + TSS region transcription start site region 120322
Cpgi5849 13 73536182 to 73536982 800 CpG island CpG island 5849
Slc6a3 13 73536747 to 73578672 41925 + protein coding gene solute carrier family 6 (neurotransmitter transporter, dopamine), member 3
Tssr120323 13 73536781 to 73536810 29 + TSS region transcription start site region 120323
Cpgi5850 13 73603718 to 73604763 1045 CpG island CpG island 5850
Tssr123185 13 73603893 to 73603943 50 - TSS region transcription start site region 123185
Tssr120324 13 73603955 to 73603966 11 + TSS region transcription start site region 120324
Clptm1l 13 73604006 to 73620605 16599 + protein coding gene CLPTM1-like
Tssr120325 13 73604007 to 73604120 113 + TSS region transcription start site region 120325
Tssr120326 13 73604135 to 73604146 11 + TSS region transcription start site region 120326
Cpgi5851 13 73626705 to 73627513 808 CpG island CpG island 5851
Tssr120327 13 73626886 to 73626937 51 + TSS region transcription start site region 120327
Tert 13 73626911 to 73649843 22932 + protein coding gene telomerase reverse transcriptase
Tssr120328 13 73627165 to 73627183 18 + TSS region transcription start site region 120328
Tssr120329 13 73627185 to 73627197 12 + TSS region transcription start site region 120329