MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:73209602-73319603

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
4930555K05Rik	13	73206091 to 73229100	23009	-	lncRNA gene	RIKEN cDNA 4930555K05 gene
Rpl31-ps2	13	73233395 to 73233737	342	+	pseudogene	ribosomal protein L31, pseudogene 2
Cpgi5837	13	73259911 to 73261334	1423		CpG island	CpG island 5837
Tssr120310	13	73260473 to 73260487	14	+	TSS region	transcription start site region 120310
Irx4	13	73260479 to 73269608	9129	+	protein coding gene	Iroquois homeobox 4
Tssr120311	13	73260510 to 73260546	36	+	TSS region	transcription start site region 120311
Tssr120312	13	73260556 to 73260569	13	+	TSS region	transcription start site region 120312
Cpgi5838	13	73263054 to 73264684	1630		CpG island	CpG island 5838
Tssr120313	13	73264602 to 73264603	1	+	TSS region	transcription start site region 120313
Cpgi5839	13	73265216 to 73265738	522		CpG island	CpG island 5839
Cpgi5840	13	73267505 to 73267713	208		CpG island	CpG island 5840
Cpgi5841	13	73268347 to 73269529	1182		CpG island	CpG island 5841
Cpgi5842	13	73270768 to 73271081	313		CpG island	CpG island 5842
Cpgi5843	13	73271390 to 73272189	799		CpG island	CpG island 5843
Gm48000	13	73273230 to 73273732	502	+	unclassified gene	predicted gene, 48000
D13Mit143.1	13	73313133 to 73313307	174		DNA segment	DNA segment, Chr 13, Massachusetts Institute of Technology 143.1
D13Mit143	13	73313310 to 73313452	142		DNA segment	DNA segment, Chr 13, Massachusetts Institute of Technology 143
Tssr120314	13	73317814 to 73317830	16	+	TSS region	transcription start site region 120314
Gm10263	13	73317844 to 73318143	299	+	pseudogene	predicted gene 10263