Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:72695458-73295604

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr120309 13 72702845 to 72702853 8 + TSS region transcription start site region 120309
Gm47890 13 72702849 to 72705392 2543 + unclassified gene predicted gene, 47890
Gm47902 13 72769431 to 72786342 16911 + lincRNA gene predicted gene, 47902
D13Mit25 13 72775952 to 72776101 149 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 25
D730050B12Rik 13 72809601 to 72816763 7162 - lincRNA gene RIKEN cDNA D730050B12 gene
Tssr123173 13 72839243 to 72839289 46 - TSS region transcription start site region 123173
Cpgi5835 13 72897710 to 72897905 195 CpG island CpG island 5835
Gm30049 13 72932327 to 72939787 7460 - lncRNA gene predicted gene, 30049
D13Mit11 13 72995458 to 72995604 146 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 11
D13Mit11.3 13 72995603 to 72995713 110 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 11.3
Gm30154 13 73132998 to 73155973 22975 + lncRNA gene predicted gene, 30154
Cpgi5836 13 73160200 to 73160732 532 CpG island CpG island 5836
D13Mit284 13 73178561 to 73178672 111 DNA segment DNA Segment, Chr 13, Massachusetts Institute of Technology 284
4930555K05Rik 13 73206091 to 73229100 23009 - lncRNA gene RIKEN cDNA 4930555K05 gene
Rpl31-ps2 13 73233395 to 73233737 342 + pseudogene ribosomal protein L31, pseudogene 2
Cpgi5837 13 73259911 to 73261334 1423 CpG island CpG island 5837
Tssr120310 13 73260473 to 73260487 14 + TSS region transcription start site region 120310
Irx4 13 73260479 to 73269608 9129 + protein coding gene Iroquois homeobox 4
Tssr120311 13 73260510 to 73260546 36 + TSS region transcription start site region 120311
Tssr120312 13 73260556 to 73260569 13 + TSS region transcription start site region 120312
Cpgi5838 13 73263054 to 73264684 1630 CpG island CpG island 5838
Tssr120313 13 73264602 to 73264603 1 + TSS region transcription start site region 120313
Cpgi5839 13 73265216 to 73265738 522 CpG island CpG island 5839
Cpgi5840 13 73267505 to 73267713 208 CpG island CpG island 5840
Cpgi5841 13 73268347 to 73269529 1182 CpG island CpG island 5841
Cpgi5842 13 73270768 to 73271081 313 CpG island CpG island 5842
Cpgi5843 13 73271390 to 73272189 799 CpG island CpG island 5843
Gm48000 13 73273230 to 73273732 502 + unclassified gene predicted gene, 48000