Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:71943960-72583968

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pregq3 13 20431342 to 72237070 51805728 QTL pregnancy QTL 3
rsl 13 56481436 to 72237021 15755585 heritable phenotypic marker regulator of sex limited protein-Slp
Cpgi5824 13 71957259 to 71957608 349 CpG island CpG island 5824
Cpgi5825 13 71958064 to 71958721 657 CpG island CpG island 5825
Irx1 13 71958232 to 71963723 5491 - protein coding gene Iroquois homeobox 1
Cpgi5826 13 71959128 to 71960291 1163 CpG island CpG island 5826
Tssr123163 13 71960343 to 71960357 14 - TSS region transcription start site region 123163
Tssr123164 13 71960369 to 71960384 15 - TSS region transcription start site region 123164
Tssr123165 13 71961702 to 71961705 3 - TSS region transcription start site region 123165
Cpgi5827 13 71962693 to 71964354 1661 CpG island CpG island 5827
Tssr123166 13 71963693 to 71963710 17 - TSS region transcription start site region 123166
Tssr123167 13 71963713 to 71963729 16 - TSS region transcription start site region 123167
Tssr123168 13 71963730 to 71963755 25 - TSS region transcription start site region 123168
D13Mit41 13 72120378 to 72120550 172 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 41
D13Jpk2 13 72160796 to 72160989 193 DNA segment DNA segment, Chr 13, Japan, Kominami 2
Bmch6 13 72236861 to 72237021 160 QTL bone mechanical trait 6
D13Mit26 13 72236861 to 72237021 160 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 26
D13Mit24 13 72236865 to 72237070 205 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 24
Tssr123169 13 72263960 to 72263968 8 - TSS region transcription start site region 123169
Gm4052 13 72350221 to 72350671 450 + pseudogene predicted gene 4052
Cpgi5828 13 72366007 to 72366291 284 CpG island CpG island 5828
Gm47836 13 72367326 to 72371647 4321 - unclassified gene predicted gene, 47836
Rpl9-ps4 13 72454762 to 72455340 578 - pseudogene ribosomal protein L9, pseudogene 4
Gm47838 13 72467977 to 72471803 3826 + unclassified gene predicted gene, 47838
Gm4057 13 72472202 to 72472569 367 - pseudogene predicted gene 4057
Gm41000 13 72532484 to 72537564 5080 - lncRNA gene predicted gene, 41000
Gm38580 13 72542765 to 72601064 58299 - lncRNA gene predicted gene, 38580
D13Mit189 13 72556791 to 72556916 125 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 189
D13Mit48 13 72561859 to 72562003 144 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 48