Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:70670272-71540439

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D13Mit188 13 70672664 to 70672778 114 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 188
Pgct1 13 70672664 to 70672778 114 QTL primordial germ cell tumor locus 1
Gm36474 13 70673122 to 70679943 6821 + lncRNA gene predicted gene, 36474
Gm36426 13 70676716 to 70681966 5250 - lincRNA gene predicted gene, 36426
Gm36607 13 70706233 to 70733207 26974 + antisense lncRNA gene predicted gene, 36607
Adamts16 13 70727802 to 70841811 114009 - protein coding gene a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16
Tssr123156 13 70750082 to 70750085 3 - TSS region transcription start site region 123156
Tssr123157 13 70827443 to 70827448 5 - TSS region transcription start site region 123157
Gm36529 13 70840451 to 70859609 19158 + antisense lncRNA gene predicted gene, 36529
Cpgi5821 13 70841237 to 70841840 603 CpG island CpG island 5821
Tssr123158 13 70841703 to 70841716 13 - TSS region transcription start site region 123158
Tssr123159 13 70841729 to 70841754 25 - TSS region transcription start site region 123159
Tssr123160 13 70841762 to 70841783 21 - TSS region transcription start site region 123160
Tssr123161 13 70841790 to 70841810 20 - TSS region transcription start site region 123161
Tssr120301 13 70872401 to 70872404 3 + TSS region transcription start site region 120301
8030423J24Rik 13 70882948 to 70884503 1555 + protein coding gene RIKEN cDNA 8030423J24 gene
Gm36734 13 71018326 to 71020421 2095 - lncRNA gene predicted gene, 36734
D13Mit280 13 71032978 to 71033093 115 DNA segment DNA Segment, Chr 13, Massachusetts Institute of Technology 280
Gm38191 13 71068480 to 71071726 3246 - unclassified gene predicted gene, 38191
Gm36785 13 71069601 to 71076179 6578 + lncRNA gene predicted gene, 36785
Gm40997 13 71079422 to 71106427 27005 - lncRNA gene predicted gene, 40997
Tssr120302 13 71104562 to 71104569 7 + TSS region transcription start site region 120302
Tssr120303 13 71104800 to 71104807 7 + TSS region transcription start site region 120303
Cpgi5822 13 71105272 to 71105439 167 CpG island CpG island 5822
Tssr4113 13 71106436 to 71106486 50 - TSS region transcription start site region 4113
Mir466f-4 13 71107089 to 71107209 120 + miRNA gene microRNA 466f-4
D13Mit313 13 71268348 to 71268469 121 DNA segment DNA Segment, Chr 13 Massachusetts Institute of Technology 313
Cpgi5823 13 71359328 to 71359489 161 CpG island CpG island 5823
Gm40998 13 71372533 to 71394296 21763 - lncRNA gene predicted gene, 40998
Tssr123162 13 71394290 to 71394299 9 - TSS region transcription start site region 123162
1700112M02Rik 13 71487613 to 71612710 125097 + lincRNA gene RIKEN cDNA 1700112M02 gene
Tssr120304 13 71487617 to 71487627 10 + TSS region transcription start site region 120304
D13Mit200.2 13 71538048 to 71538158 110 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 200.2