Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:70106005-71200787

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm3772 13 70021959 to 70119949 97990 + lincRNA gene predicted gene 3772
AU017674 13 70149800 to 70205972 56172 + lincRNA gene expressed sequence AU017674
Gm26018 13 70168832 to 70168959 127 + snoRNA gene predicted gene, 26018
4930520P13Rik 13 70232822 to 70248122 15300 + lincRNA gene RIKEN cDNA 4930520P13 gene
Cpgi5819 13 70234482 to 70234639 157 CpG island CpG island 5819
Gm36216 13 70278705 to 70290082 11377 + lncRNA gene predicted gene, 36216
Tssr120294 13 70292933 to 70292938 5 + TSS region transcription start site region 120294
D13Mit187 13 70328144 to 70328271 127 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 187
Gm47706 13 70422491 to 70422781 290 - pseudogene predicted gene, 47706
Tssr4112 13 70535500 to 70535503 3 + TSS region transcription start site region 4112
Gm36267 13 70550859 to 70574289 23430 - lncRNA gene predicted gene, 36267
Tssr123153 13 70573149 to 70573159 10 - TSS region transcription start site region 123153
Tssr120295 13 70573230 to 70573243 13 + TSS region transcription start site region 120295
1700100L14Rik 13 70573241 to 70576104 2863 + antisense lncRNA gene RIKEN cDNA 1700100L14 gene
Tssr120296 13 70574431 to 70574472 41 + TSS region transcription start site region 120296
Tssr120297 13 70574477 to 70574495 18 + TSS region transcription start site region 120297
Tssr120298 13 70574504 to 70574515 11 + TSS region transcription start site region 120298
Ice1 13 70588689 to 70637840 49151 - protein coding gene interactor of little elongation complex ELL subunit 1
Gm40996 13 70610786 to 70614925 4139 - lncRNA gene predicted gene, 40996
Cpgi5820 13 70637189 to 70638303 1114 CpG island CpG island 5820
Tssr123154 13 70637740 to 70637745 5 - TSS region transcription start site region 123154
Tssr123155 13 70637769 to 70637825 56 - TSS region transcription start site region 123155
D13Ertd570e 13 70649596 to 70649818 222 DNA segment DNA segment, Chr 13, ERATO Doi 570, expressed
Tssr120299 13 70650141 to 70650149 8 + TSS region transcription start site region 120299
D030007L05Rik 13 70650144 to 70655979 5835 + lincRNA gene RIKEN cDNA D030007L05 gene
Tssr120300 13 70650182 to 70650219 37 + TSS region transcription start site region 120300
Gm36377 13 70651005 to 70655787 4782 - lincRNA gene predicted gene, 36377
Pgct1 13 70672664 to 70672778 114 QTL primordial germ cell tumor locus 1
D13Mit188 13 70672664 to 70672778 114 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 188
Gm36474 13 70673122 to 70679943 6821 + lncRNA gene predicted gene, 36474
Gm36426 13 70676716 to 70681966 5250 - lincRNA gene predicted gene, 36426
Gm36607 13 70706233 to 70733207 26974 + antisense lncRNA gene predicted gene, 36607
Adamts16 13 70727802 to 70841811 114009 - protein coding gene a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16
Tssr123156 13 70750082 to 70750085 3 - TSS region transcription start site region 123156
Tssr123157 13 70827443 to 70827448 5 - TSS region transcription start site region 123157
Gm36529 13 70840451 to 70859609 19158 + antisense lncRNA gene predicted gene, 36529
Cpgi5821 13 70841237 to 70841840 603 CpG island CpG island 5821
Tssr123158 13 70841703 to 70841716 13 - TSS region transcription start site region 123158
Tssr123159 13 70841729 to 70841754 25 - TSS region transcription start site region 123159
Tssr123160 13 70841762 to 70841783 21 - TSS region transcription start site region 123160
Tssr123161 13 70841790 to 70841810 20 - TSS region transcription start site region 123161
Tssr120301 13 70872401 to 70872404 3 + TSS region transcription start site region 120301
8030423J24Rik 13 70882948 to 70884503 1555 + protein coding gene RIKEN cDNA 8030423J24 gene
Gm36734 13 71018326 to 71020421 2095 - lncRNA gene predicted gene, 36734
D13Mit280 13 71032978 to 71033093 115 DNA segment DNA Segment, Chr 13, Massachusetts Institute of Technology 280
Gm38191 13 71068480 to 71071726 3246 - unclassified gene predicted gene, 38191
Gm36785 13 71069601 to 71076179 6578 + lncRNA gene predicted gene, 36785
Gm40997 13 71079422 to 71106427 27005 - lncRNA gene predicted gene, 40997
Tssr120302 13 71104562 to 71104569 7 + TSS region transcription start site region 120302
Tssr120303 13 71104800 to 71104807 7 + TSS region transcription start site region 120303
Cpgi5822 13 71105272 to 71105439 167 CpG island CpG island 5822
Tssr4113 13 71106436 to 71106486 50 - TSS region transcription start site region 4113
Mir466f-4 13 71107089 to 71107209 120 + miRNA gene microRNA 466f-4